This dataset contains links to the following files:
Downloadable archive files containing normalized expression values and meta-data (as displayed in heatmap) for analysis:
| RNA-Seq Gencode v10 summarized to exons | exons_matrix_csv.zip |
| RNA-Seq Gencode v10 summarized to genes | genes_matrix_csv.zip |
| Exon microarray summarized to probe sets | exon_array_matrix_csv.zip |
| Exon microarray summarized to genes | gene_array_matrix_csv.zip |
White paper describing normalisation procedures: Transcription_Profiling.pdf
Downloadable archive files containing normalized expression values for each brain and meta-data for analysis:
| H376.IIIA.02, male, 15 pcw | lmd_matrix_12840.zip |
| H376.IIIB.02. female, 16 pcw | lmd_matrix_14751.zip |
| H376.IV.02, female, 21 pcw | lmd_matrix_12566.zip |
| H376.IV.03, female, 21 pcw | lmd_matrix_12690.zip |
Locations for downloading raw misroarray data: LMD_microarray_link_and_tissue_sample_metadata.csv
3-D expert annotation of 22 major fiber tracts across 8 developmental stages accompanied by annotation of the Developmental Transcriptome survey sampling sites.
| 14 pcw annotation | fiber tracts | Stage_3A_14_pcw_Fiber_tracts.zip |
| 14 pcw annotation | structures | Stage_3A_14_pcw_Transcriptome_structures.zip |
| 17 pcw annotation | fiber tracts | Stage_3B_17_pcw_Fiber_tracts.zip |
| 17 pcw annotation | structures | Stage_3B_17_pcw_Transcriptome_structures.zip |
| 19 pcw annotation | fiber tracts | Stage_4_19_pcw_Fiber_tracts.zip |
| 19 pcw annotation | structures | Stage_4_19_pcw_Transcriptome_structures.zip |
| 37 pcw annotation | fiber tracts | Stage_5_37_pcw_Fiber_tracts.zip |
| 37 pcw annotation | structures | Stage_5_37_pcw_Transcriptome_structures.zip |
| 3 yrs annotation | fiber tracts | Stage_8_3_year_Fiber_tracts.zip |
| 8 yrs annotation | fiber tracts | Stage_9_8_year_Fiber_tracts.zip |
| 15 yrs annotation | fiber tracts | Stage_10_15_year_Fiber_tracts.zip |
| 32 yrs annotation | fiber tracts | Stage_11_32_year_Fiber_tracts.zip |
Data description taken from http://brainspan.org/static/download.html