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Polymer chains oriented vertically if loaded from HELM #2059

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AlexeyGirin opened this issue Jul 2, 2024 · 1 comment
Open

Polymer chains oriented vertically if loaded from HELM #2059

AlexeyGirin opened this issue Jul 2, 2024 · 1 comment
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@AliaksandrDziarkach
Labels
Bug HELM Bucket: Bugs related to Export to HELM format Priority: Medium
Milestone
Indigo-1.28.0-rc....

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@AlexeyGirin
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Steps to Reproduce

  1. Go to Macromolecules mode - Flex mode
  2. Load using paste from clipboard IDT type: PEPTIDE1{A}|RNA1{R(A)P}$RNA1,PEPTIDE1,3:R2-1:R1$$$V2.0
    image

Actual behavior
Polymer chains oriented vertically
image

Expected behavior
Polymer chains oriented horizontally
image

Versions

  • Ketcher Version 2.23.0-rc.1 Build at 2024-07-02; 08:57:41
  • Indigo Toolkit Version 1.22.0-rc.1.0-g2bef0ce6c-wasm32-wasm-clang-19.0.0
  • Windows 10 Pro
  • Chrome Version 126.0.6478.127 (Official Build) (64-bit)

Issue found while testing - #1188
@AlexeyGirin AlexeyGirin added Bug Priority: High HELM Bucket: Bugs related to Export to HELM format labels Jul 2, 2024
@AlexeyGirin AlexeyGirin added this to the Indigo-1.22.0-rc.2 milestone Jul 2, 2024
@AlexeyGirin AlexeyGirin changed the title Polymer chains oriented vertically if loaded from HELM (PEPTIDE1{A}|RNA1{R(A)P}$RNA1,PEPTIDE1,3:R2-1:R1$$$V2.0) Polymer chains oriented vertically if loaded from HELM Jul 3, 2024
@AliaksandrDziarkach AliaksandrDziarkach self-assigned this Jul 8, 2024
@AliaksandrDziarkach
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Looks like we decided to do not layout macromolecules at indigo side because we already have layout at ketcher side - snake view.
So I think it should fixed at ketcher side - just always do layout after load helm.

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@AliaksandrDziarkach AliaksandrDziarkach

Labels
Bug HELM Bucket: Bugs related to Export to HELM format Priority: Medium
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Milestone
Indigo-1.28.0-rc.1 (Stabilization)
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@AlexanderSavelyev @even1024 @AliaksandrDziarkach @AlexeyGirin