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Macro: System displays chain as two sequences #4400

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AlexeyGirin opened this issue Apr 3, 2024 · 2 comments
Open

Macro: System displays chain as two sequences #4400

AlexeyGirin opened this issue Apr 3, 2024 · 2 comments
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@AlexeyGirin
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AlexeyGirin commented Apr 3, 2024

Steps to Reproduce

  1. Switch to Macro
  2. Load from file: System displays nucleotide as @ symbol.zip
  3. Switch to Sequence mode
    image

Actual behavior
System displays chain as two sequences
image

Expected behavior
System shows one sequence
image

As per specification:

In sequence view nucleotide should be displayed as a letter which corresponds to the natural analog of base that is a part of nucleotide. If nucleotide has a modified component (phosphate, sugar, or base), then a letter should be marked by some unambiguous designation (see mockups in comments).

Modified phosphate - any phosphate except 'P'
Modified sugar - any sugar except 'R'
Modified base - any base except 'A', 'C', 'G', 'T', 'U'

301212531-97da3f28-d642-478a-ab5a-5688b0722ddb

Versions:
Windows 10
Chrome Version 112.0.5615.138 (Official Build) (64-bit)
Ketcher Version 2.20.0-rc.2 Build at 2024-04-02; 05:31:05
Indigo Toolkit Version 1.20.0-dev.1.19-gd0224f91-wasm32-wasm-clang-12.0.0

Issue found in the context of testing - #3734

@AlexeyGirin AlexeyGirin added the bug label Apr 3, 2024
@AlexeyGirin AlexeyGirin changed the title System displays nucleotide as @ symbol System displays chain as two sequences Apr 3, 2024
@AlexeyGirin AlexeyGirin added this to the Ketcher 2.21.0-rc.1 milestone Apr 3, 2024
@AlexeyGirin AlexeyGirin changed the title System displays chain as two sequences Macro: System displays chain as two sequences Apr 10, 2024
@Zhirnoff
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The issue has been moved from 2.21.0-rc.2 to 2.22.0-rc.1 after discussion with management and in accordance with the testing flow process.

@AlexeyGirin AlexeyGirin added the Sequence mode Bucket: Sequence mode related issues label Apr 25, 2024
@AlexeyGirin
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Moved to Refined Backlog since not fixed over 1 release

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