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Replacing all DNAs in sequence in view mode on CHEM (A6OH) from the library causes invalid flex canvas #5253

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AlexeyGirin opened this issue Aug 8, 2024 · 1 comment · Fixed by #5259 or #5271
Closed

Replacing all DNAs in sequence in view mode on CHEM (A6OH) from the library causes invalid flex canvas #5253

AlexeyGirin opened this issue Aug 8, 2024 · 1 comment · Fixed by #5259 or #5271
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@rrodionov91
Labels
bug Flex mode Bucket: Flex canvas related mode Monomer Library Priority: High Sequence mode Bucket: Sequence mode related issues
Milestone
Ketcher 2.24.0-rc.2

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@AlexeyGirin
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AlexeyGirin commented Aug 8, 2024 •
edited
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Steps to Reproduce

  1. Go to Macromolecules mode - Sequence mode
  2. Load from file: Replacing all DNAs in sequence in view mode from the library causes undeletable monomer on the canvas (all of them).zip
    image
  3. Select all monomers (in view mode)
    image
  4. Go to Library - CHEM tab
  5. Click on A6OH chem
    image
  6. Switch to Flex mode

Actual behavior
Sequence contains hanging bond
image

Expected behavior
No hanging bonds
image

Versions

  • Ketcher Version 2.24.0-rc.1 Build at 2024-08-06; 19:17:47
  • Indigo Toolkit Version 1.23.0-rc.1.0-g85f89b8f5-wasm32-wasm-clang-19.0.0
  • Windows 10 Pro
  • Chrome Version 127.0.6533.100 (Official Build) (64-bit)

Related issue - #4878
@AlexeyGirin AlexeyGirin added bug Priority: High Monomer Library Sequence mode Bucket: Sequence mode related issues Flex mode Bucket: Flex canvas related mode labels Aug 8, 2024
@AlexeyGirin AlexeyGirin added this to the Ketcher 2.24.0-rc.2 milestone Aug 8, 2024
@rrodionov91 rrodionov91 self-assigned this Aug 8, 2024
This was linked to pull requests Aug 8, 2024
Backmerge: #5242 - Replace phosphate at the end with petide causes cycled polymer #5259
Merged
#5242 - Replace phosphate at the end with petide causes cycled polymer #5271
Merged
@AlexeyGirin
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Fixed.
image

  • Ketcher Version 2.24.0-rc.2 Build at 2024-08-14; 19:00:14
  • Indigo Toolkit Version 1.23.0-rc.2.0-g6a2a7526a-wasm32-wasm-clang-19.0.0
  • Chrome Version 127.0.6533.100 (Official Build) (64-bit)
  • Win10

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Assignees

@rrodionov91 rrodionov91

Labels
bug Flex mode Bucket: Flex canvas related mode Monomer Library Priority: High Sequence mode Bucket: Sequence mode related issues
Projects
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Milestone
Ketcher 2.24.0-rc.2
2 participants
@rrodionov91 @AlexeyGirin