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A similar approach is used in Plotly - Essentially using a 3D scatterplot to visualize NetworkX networks. Not sure whether this is the way to go for D3.
Networkx supports 3D network layouts, e.g.
cords = nx.spring_layout(G, dim = 3, ...)
Any plans of adding support for this? I'm not too familiar with D3 but seems like it should be possible.
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