.pre-commit-config.yaml

repos:
-   repo: https://github.com/pre-commit/pre-commit-hooks
    rev: v5.0.0
    hooks:
    -   id: check-added-large-files
    -   id: check-ast
    -   id: fix-byte-order-marker
    -   id: check-builtin-literals
    -   id: check-case-conflict
    -   id: check-docstring-first
    -   id: check-executables-have-shebangs
    -   id: check-merge-conflict
    -   id: check-yaml
    -   id: debug-statements
    -   id: end-of-file-fixer
    -   id: file-contents-sorter
        files: requirements-dev.txt
    -   id: fix-encoding-pragma
    -   id: mixed-line-ending
    -   id: requirements-txt-fixer
    -   id: trailing-whitespace

-   repo: https://github.com/keewis/blackdoc
    rev: v0.3.9
    hooks:
        -   id: blackdoc

-   repo: https://github.com/codespell-project/codespell
    rev: v2.3.0
    hooks:
        -   id: codespell
            exclude: >
                (?x)^(
                    .*resources/primers.txt|
                )$

-   repo: https://github.com/tox-dev/pyproject-fmt
    rev: "v2.5.0"
    hooks:
        -   id: pyproject-fmt

-   repo: https://github.com/pre-commit/mirrors-mypy
    rev: 'v1.13.0'
    hooks:
    -   id: mypy
        args:
        -   --strict
        -   --ignore-missing-imports
        -   --explicit-package-bases
        additional_dependencies: [tokenize-rt==3.2.0]

-   repo: https://github.com/aio-libs/sort-all
    rev: "v1.3.0"
    hooks:
    -   id: sort-all
        types: [file, python]

-   repo: https://github.com/pre-commit/pygrep-hooks
    rev: 'v1.10.0'
    hooks:
    -   id: python-check-blanket-noqa
    -   id: python-check-blanket-type-ignore
    -   id: python-check-mock-methods
    -   id: python-no-eval
    -   id: python-no-log-warn
    -   id: python-use-type-annotations
    -   id: rst-backticks
    -   id: rst-directive-colons
    -   id: rst-inline-touching-normal
    -   id: text-unicode-replacement-char

-   repo: https://github.com/pre-commit/sync-pre-commit-deps
    rev: v0.0.1
    hooks:
    -   id: sync-pre-commit-deps

-   repo: https://github.com/PyCQA/bandit
    rev: '1.7.10'
    hooks:
    -   id: bandit
        exclude: ^tests/

-   repo: https://github.com/PyCQA/pylint
    rev: 'v3.3.1'
    hooks:
    -   id: pylint
        additional_dependencies:
          - "pytest"
        args:
        -   src
        -   --disable=logging-fstring-interpolation
        -   --disable=relative-beyond-top-level

-   repo: https://github.com/PyCQA/doc8
    rev: 'v1.1.2'
    hooks:
    -   id: doc8

-   repo: https://github.com/PyCQA/autoflake
    rev: 'v2.3.1'
    hooks:
    -   id: autoflake

-   repo: https://github.com/psf/black
    rev: 24.10.0
    hooks:
        -   id: black

-   repo: https://github.com/astral-sh/ruff-pre-commit
    rev: v0.7.3
    hooks:
    -   id: ruff
        args:
        -   --fix
    -   id: ruff-format

-   repo: local
    hooks:
    -   id: pytest-cov
        name: pytest-cov
        entry: pytest --cov --cov-fail-under=100
        language: system
        pass_filenames: false
        always_run: true

ci:
    autofix_commit_msg: |
        [pre-commit.ci] auto fixes from pre-commit.com hooks

        for more information, see https://pre-commit.ci
    autofix_prs: true
    autoupdate_branch: ''
    autoupdate_commit_msg: '[pre-commit.ci] pre-commit autoupdate'
    autoupdate_schedule: weekly
    skip: [pytest-cov]
    submodules: false