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Metric to show improvement of multivariate predictions #31

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hsun3163 opened this issue Nov 26, 2020 · 1 comment
Open

Metric to show improvement of multivariate predictions #31

hsun3163 opened this issue Nov 26, 2020 · 1 comment
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Discussions Extra attention is needed Immediately next Good for newcomers

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@hsun3163
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Need to find a way to quantify the improvement of power via heritability. The number of significant gene could works, but variance explained seems to be a better indicator.

Maybe utmost paper have talked about it, need to reread.

@gaow
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gaow commented Nov 27, 2020

@hsun3163 you can definitely compute heritability by definition, then compare.

Another typical approach is to split data into train/test sets and compute the correlation coefficient between the estimated and true values in the test set, using estimates from the train set.

@gaow gaow changed the title Heritability for multivariate analysis Metric to show improvement of multivariate predictions Feb 14, 2021
@gaow gaow added Discussions Extra attention is needed Immediately next Good for newcomers labels Feb 14, 2021
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