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PAINT - NOT'ing all annotations for a node #57

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pgaudet opened this issue Jan 8, 2020 · 4 comments
Open

PAINT - NOT'ing all annotations for a node #57

pgaudet opened this issue Jan 8, 2020 · 4 comments
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@pgaudet
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pgaudet commented Jan 8, 2020

Hello,
When there is a long branch (for example) we sometimes want to put NOT-IRD annotations for all terms, since we don't know what functions may have been conserved. When there are many annotations this is tedious. It would be nice to be able to NOT all annotations for a node in a single operation.

Thanks, Pascale

@pgaudet pgaudet assigned pgaudet and mugitty and unassigned pgaudet Jan 8, 2020
@krchristie
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Isn't putting "NOT" on these annotations saying that you know that it is NOT x. It seems like what you would really want to do is block propagations so that you don't make an annotation at all.

@pgaudet
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pgaudet commented Feb 27, 2020

The NOT -IRD is a 'stop propagation' those are not exported, so we don't state 'NOT x'.

@krchristie
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Great. I seem to recall that there was a period where PAINT was definitely generating NOT annotations in all the places where I only wanted to block propagation.

@pgaudet
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pgaudet commented Feb 28, 2020

Right - this is now fixed :)

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