.nengobones.yml

project_name: Nengo
pkg_name: nengo
repo_name: nengo/nengo
description: Tools for building and simulating large-scale neural models

copyright_start: 2013

license_rst: {}

contributing_rst: {}

contributors_rst: {}

manifest_in:
  graft:
    - nengo-data
  recursive-include:
    - nengo *.md
    - nengo *.rst
    - nengo *.txt

setup_py:
  package_data:
    nengo:
      - nengo-data/nengorc
  py_modules:
    - pytest_nengo
  entry_points:
    nengo.backends:
      - reference = nengo:Simulator
    pytest11:
      - nengo = pytest_nengo
  install_req:
    - numpy>=1.13
  docs_req:
    - sphinx>=1.8
    - jupyter
    - matplotlib>=1.4
    - nbsphinx
    - numpydoc>=0.6
    - nengo_sphinx_theme>=1.2.0
  optional_req:
    - scipy>=0.13
    - scikit-learn
  tests_req:
    - jupyter
    - matplotlib>=1.4
    - pytest>=3.6
    - pytest-allclose
    - pytest-plt
    - pytest-rng
  classifiers:
    - "Development Status :: 5 - Production/Stable"
    - "Framework :: Nengo"
    - "Intended Audience :: Science/Research"
    - "License :: Free for non-commercial use"
    - "Operating System :: OS Independent"
    - "Programming Language :: Python :: 3 :: Only"
    - "Programming Language :: Python :: 3.5"
    - "Programming Language :: Python :: 3.6"
    - "Programming Language :: Python :: 3.7"
    - "Programming Language :: Python :: 3.8"
    - "Topic :: Scientific/Engineering :: Artificial Intelligence"

setup_cfg:
  coverage:
    omit_files:
      - "nengo/_vendor/*"
      - "nengo/spa/*"
      # omit filter_design.py until it gets moved to nengo/_vendor
      - "nengo/utils/filter_design.py"
  flake8:
    exclude:
      - compat.py
      - nengo/_vendor
  pytest:
    norecursedirs:
      - "plots"
      - "nengo/_vendor"
    filterwarnings:
      - always
      - "ignore::ImportWarning"
      - "ignore:(Buffer|Memory|The nengo\\.spa):DeprecationWarning"
      - "ignore:Skipping some optimization steps"
      - "ignore:SciPy is not installed"
      - "ignore:numpy.(dtype|ufunc) size changed"
      - "ignore:Object <BasalGanglia \"bg\"> has already been built"
      - "ignore:Object <Thalamus \"thalamus\"> has already been built"
      - "ignore:IPython.core.inputsplitter is deprecated"
      - "ignore:'step_math' has been renamed"
    plt_filename_drop:
      - ^nengo\.
      - tests\.
  pylint:
    ignore:
      - _vendor
      - compat.py
      - nengo/spa
    disable:
      # TODO: fix these and start checking for them
      - abstract-method
      - bad-continuation
      - bad-string-format-type
      - broad-except
      - not-callable
      - chained-comparison
      - consider-iterating-dictionary
      - consider-merging-isinstance
      - consider-using-in
      - cyclic-import
      - eval-used
      - exec-used
      - expression-not-assigned
      - global-statement
      - inconsistent-return-statements
      - invalid-unary-operand-type
      - keyword-arg-before-vararg
      - logging-format-interpolation
      - missing-docstring
      - nonexistent-operator
      - pointless-statement
      - redefined-argument-from-local
      - redefined-outer-name
      - reimported
      - single-string-used-for-slots
      - superfluous-parens
      - too-many-ancestors
      - trailing-comma-tuple
      - undefined-loop-variable
      - unexpected-special-method-signature
      - unnecessary-pass
      - unused-variable
    known_third_party:
      - mpl_toolkits
      - pytest_allclose

docs_conf_py:
  intersphinx_mapping:
    scipy: 'https://docs.scipy.org/doc/scipy/reference'
    sklearn: 'https://scikit-learn.org/dev'
  analytics_id: UA-41658423-2
  extensions:
    - nengo_sphinx_theme.ext.autoautosummary
    - nengo_sphinx_theme.ext.resolvedefaults
    - sphinx.ext.inheritance_diagram
  doctest_setup:
    - "import numpy as np"
    - "if np.__version__ >= '1.14':"
    - "    np.set_printoptions(legacy='1.13')"
  html_redirects:
    backend_api.html: backend-api.html
    examples/advanced/functions_and_tuning_curves.html:
      examples/advanced/functions-and-tuning-curves.html
    examples/advanced/inhibitory_gating.html:
      examples/advanced/inhibitory-gating.html
    examples/advanced/matrix_multiplication.html:
      examples/advanced/matrix-multiplication.html
    examples/advanced/nef_algorithm.html: examples/advanced/nef-algorithm.html
    examples/advanced/nef_summary.html: examples/advanced/nef-summary.html
    examples/basic/2d_representation.html: examples/basic/2d-representation.html
    examples/basic/communication_channel.html:
      examples/basic/communication-channel.html
    examples/basic/many_neurons.html: examples/basic/many-neurons.html
    examples/basic/single_neuron.html: examples/basic/single-neuron.html
    examples/basic/two_neurons.html: examples/basic/two-neurons.html
    examples/dynamics/controlled_integrator.html:
      examples/dynamics/controlled-integrator.html
    examples/dynamics/controlled_integrator2.html:
      examples/dynamics/controlled-integrator2.html
    examples/dynamics/controlled_oscillator.html:
      examples/dynamics/controlled-oscillator.html
    examples/dynamics/lorenz_attractor.html:
      examples/dynamics/lorenz-attractor.html
    examples/learning/learn_associations.html:
      examples/learning/learn-associations.html
    examples/learning/learn_communication_channel.html:
      examples/learning/learn-communication-channel.html
    examples/learning/learn_product.html: examples/learning/learn-product.html
    examples/learning/learn_square.html: examples/learning/learn-square.html
    examples/learning/learn_unsupervised.html:
      examples/learning/learn-unsupervised.html
    examples/networks/basal_ganglia.html: examples/networks/basal-ganglia.html
    examples/networks/ensemble_array.html: examples/networks/ensemble-array.html
    examples/networks/integrator_network.html:
      examples/networks/integrator-network.html
    examples/usage/delay_node.html: examples/usage/delay-node.html
    examples/usage/network_design_advanced.html:
      examples/usage/network-design-advanced.html
    examples/usage/network_design.html: examples/usage/network-design.html
    examples/usage/rectified_linear.html: examples/usage/rectified-linear.html
    examples/usage/tuning_curves.html: examples/usage/tuning-curves.html
    frontend_api.html: frontend-api.html
    getting_started.html: getting-started.html
    improving_performance.html: improving-performance.html
    user_guide.html: user-guide.html
  autoautosummary_change_modules:
    nengo:
      - nengo.learning_rules.PES
      - nengo.learning_rules.BCM
      - nengo.learning_rules.Oja
      - nengo.learning_rules.Voja
      - nengo.neurons.Direct
      - nengo.neurons.RectifiedLinear
      - nengo.neurons.SpikingRectifiedLinear
      - nengo.neurons.Sigmoid
      - nengo.neurons.Tanh
      - nengo.neurons.LIF
      - nengo.neurons.LIFRate
      - nengo.neurons.AdaptiveLIF
      - nengo.neurons.AdaptiveLIFRate
      - nengo.neurons.Izhikevich
      - nengo.neurons.RegularSpiking
      - nengo.neurons.PoissonSpiking
      - nengo.neurons.StochasticSpiking
      - nengo.synapses.LinearFilter
      - nengo.synapses.Lowpass
      - nengo.synapses.Alpha
      - nengo.transforms.Dense
      - nengo.transforms.Sparse
      - nengo.transforms.Convolution
      - nengo.config.Config
    nengo.builder:
      - nengo.builder.operator.Operator
      - nengo.builder.signal.Signal

travis_yml:
  python: 3.6
  global_vars:
    NUMPY: numpy
  jobs:
    - script: static
    - script: test-coverage-scipy
      test_args: --memory --plots
    - script: test-coverage
      test_args: --plots
      python: 3.5
    - script: docs
      apt_install:
        - graphviz
        - pandoc
    - env:
        NUMPY: numpy==1.13
      if: "branch =~ ^release-candidate-*"
      cache: false  # disable the cache for one build to make sure that works
    - env:
        NUMPY: numpy==1.14
      if: "branch =~ ^release-candidate-*"
    - env:
        NUMPY: numpy==1.15
      if: "branch =~ ^release-candidate-*"
    - env:
        NUMPY: numpy==1.16
      if: "branch =~ ^release-candidate-*"
    - env:
        NUMPY: numpy==1.17
      if: "branch =~ ^release-candidate-*"
    - dist: bionic
      python: 3.7
    - dist: bionic
      python: 3.8
  pypi_user: tbekolay
  deploy_dists:
    - sdist
    - bdist_wheel
  slack_notifications: "bWVmSjW3kLZEEmJxpEmcrxlOFMVK24pYbgTZ2pjra0KMmwA2OJ11BsjdDW0fDE\
    Vd4JJGkxV3vOghsufRTrKE10reLHSM0Jtum8PYvlYk7riE8yUish0VCwxa8gYZpsH41Q7IlJQB04y5XxwY\
    MqSnDepOAmB8C5babwYJkzfF5Dw="

ci_scripts:
  - template: static
  - template: test
    pip_install:
      - $NUMPY
  - template: test
    output_name: test-coverage
    pip_install:
      - $NUMPY
    coverage: true
  - template: test
    output_name: test-coverage-scipy
    pip_install:
      - $NUMPY
      - scipy
      - scikit-learn
    coverage: true
  - template: docs
    pip_install:
      - $NUMPY
      - scipy
      - matplotlib
  - template: deploy

codecov_yml:
  abs_target: 100%

pre_commit_config_yaml:
  exclude:
    - "_vendor/*"

pyproject_toml:
  exclude:
    - "_vendor/*"