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Have tox skip linting unless requested, for now
This is to make it so simple `tox` usage has the expected property of leaving all source code files in the working tree unchanged. As noted in c66257e, linting how sometimes performs auto-fixes since #1862, and the pre-commit command in tox.ini, which had also run `black --check`, will do even more file editing with #1865. The bifurcation for black into separate mutating and non-mutating hooks, introduced in 5d8ddd9 (#1693), is not carried over into Ruff autoformatting in #1865. But also it: - Was not necessarily a good approach, and likely should not be preserved in any form. It is an unusual and unintuitive use of pre-commit. (It can be brought back if no better approach is found, though.) - Was done to avoid a situation where it was nontrivial to set up necessary dependencies for linting in the GitPython virtual environment itself, because flake8 and its various plugins would have to be installed. They were not listed in any existing or newly introduced extra (for example, they were not added to test-requirements.txt) in part in the hope that they would all be replaced by Ruff, which happened in #1862. - Already does not achieve its goal since #1862, since it was (probably rightly) not extended to Ruff linting to use/omit --fix. Now that Ruff is being used, people can run `pip install ruff` in a virtual environment, then run the `ruff` command however they like. This takes the place of multiple tools and plugins. This commit *avoids* doing any of the following, even though it may be useful to do them later: - This does not give specific instructions in the readme for installing and running ruff (and c66257e before this also omits that). This can be added later and the best way to document it may depend on some other upcoming decisions (see below). - This does not add ruff to the test extra or as any other kind of extra or optional dependency. Although the test extra currently contains some packages not used for running unit tests, such as pre-commit and mypy, adding Ruff will cause installation to take a long time and/or or fail on some platforms like Cygwin where Ruff has to be built from (Rust) source code. This can be solved properly by reorganizing the extras, but that is likely to wait until they are expressed completely inside pyproject.toml rather than one per requirements file (see discussion in comments in #1716 for general information about possible forthcoming changes in how the project is defined). - This does not update tox.ini to run ruff directly, which could be done by splitting the current lint tox environment into two or three environments for Python linting, Python autoformatting, and the miscellaneous other tasks performed by pre-commit hooks, only the latter of which would use the pre-commit command. Whether and how this should be done may depend on other forthcoming changes. - This does not remove or update the Makefile "lint" target. That target should perhaps not have been added, and was always meant to be improved/replaced, since everything else in the top-level Makefile is for building and publishing releases. See 5d15063 (#1693). This is likewise not done now since it may depend on as-yet unmerged changes and tooling decisions not yet made. It should be feasible to do together when further updating tox.ini. - This does not update tox.ini, Makefile, or the lint.yml GitHub Actions workflow to omit the manual hook-stage, which will be unused as of #1865. This would complicate integration of changes, and once it is known that it won't be needed, it can removed. The situation with the tox "lint" environment is thus now similar to that of the tox "html" environment when it was added in e6ec6c8 (#1667), until it was improved in f094909 (#1693) to run with proper isolation.
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