- Updated component package versions
- bioformats 7.3.0
- bioformats2raw 0.9.3
- raw2ometiff 0.7.1
- CreateNGFF has a new option to omit original metadata from METADATA.ome.xml within the .zarr file
- raw2ometiff now scans .zarr files much faster
- The underlying bioformats package is currently unable to read some formats on ARM-based MacOS systems.
- Updated component package versions
- bioformats 7.2.0
- bioformats2raw 0.9.2
- Fixed a bug when trying to open a deleted image
- Custom directories which do not exist will now be created when saving task settings
- The underlying bioformats package is currently unable to read some formats on ARM-based MacOS systems.
- raw2ometiff execution cannot be reliably interrupted until it finishes the initial scan of a .zarr file.
- Redesigned user interface, modernised layout and design.
- NGFF-Converter now directly interfaces with bioformats2raw/raw2ometiff instead of generating a CLI call.
- Modularised conversion into "Jobs" (internally called "Workflows") comprised of a sequence of "Tasks".
- Added virtual "Output" task to control destination files.
- Added full settings configuration panels for all tasks.
- Added progress bars per-task during execution.
- Revised configuration workflow. Settings are now initialised to user-defined defaults. Jobs can be configured individually or in bulk.
- Job execution now uses a proper queue, so jobs can be started/stopped individually.
- Execution logs are now stored and delivered per-job.
- Added configuration options for working directory and log directory (if logging to file).
- Updated component package versions
- bioformats 7.1.0
- bioformats2raw 0.9.1
- raw2ometiff 0.7.0
- Updated documentation
- The underlying bioformats package is currently unable to read some formats on ARM-based MacOS systems.
- raw2ometiff execution cannot be reliably interrupted until it finishes the initial scan of a .zarr file.
- Update component package versions (#41)
- bioformats 6.13.0
- bioformats2raw 0.7.0
- raw2ometiff 0.5.0
- Expand documentation (#48)
- Remove year from Copyright in About window (#37)
- Temporarily drop support for M1 Macs, breaks x86_64
- Fix app image for code signing
- Add limited support for M1 Macs
- Switch to app image to aid code signing workflow (#36).
- NGFF-Converter now generates OME-NGFF files according to version 0.4 of the format specification.
- See the bioformats2raw changelog for details of new features.
- bioformats2raw, raw2ometiff, bioformats and logback versions have been updated (#27, #30).
- MIRAX .mrxs files can now be converted (#31).
- Fixed an issue which could prevent running conversions from stopping upon exit (#33).
- Improvements to the build/packaging system. Application filesize should now be much smaller (#29, #24).
- UI tweaks (#28)
- Initial public release