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it is difficult to load local .bw file.
The text was updated successfully, but these errors were encountered:
Could you please elaborate on what makes it difficult for you to load the .bw file?
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Using the same code, the local bw file can be successfully visualised on windows platform but not on ssh linked linux platform. code:
import streamlit as st import gosling as gos import streamlit_gosling as st_gos size = 500 # create visualization using gosling @st.cache_data def chart(): bigwig_url="./ExcitatoryNeurons-insertions_bin100_RIPnorm.bw" data_bw = gos.bigwig(url=bigwig_url, column="position", value="value") excitatory_neurons = gos.Track(data_bw).mark_bar().encode( x="position:G", y="value:Q", ).properties(height=100) return gos.stack(excitatory_neurons).properties( xDomain=gos.GenomicDomain(chromosome="chr1", interval=[0, 100000000]), ) st_gos.from_gos( spec=chart(), id='id', height=size+ 100 )
on the windows: on the linux:
It is difficult to check if there's a problem with the file path
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it is difficult to load local .bw file.
The text was updated successfully, but these errors were encountered: