Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Implement alternative NovaSeq error models #31

Open
cjfields opened this issue Nov 30, 2021 · 0 comments
Open

Implement alternative NovaSeq error models #31

cjfields opened this issue Nov 30, 2021 · 0 comments
Labels
DSL2 Prioritize for DSL2 implementation

Comments

@cjfields
Copy link
Contributor

See: benjjneb/dada2#1307

NovaSeq data does seem to be considerably noisier than MiSeq (I wouldn't be surprised if NextSeq is similar to NovaSeq as well). In particular the A2G and T2C transition errors are notable.
@cjfields cjfields added the DSL2 Prioritize for DSL2 implementation label Aug 23, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
DSL2 Prioritize for DSL2 implementation
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@cjfields