Question about incoming phenotypes

[ameintjes]

Confirm how we should handle phenotypes.

There are rows in the variant file with no phenotype ID and phenotypes names like "Allele T is associated with decreased dose of warfarin as compared to allele C"

...	phenotype_id	...	phenotype_name
...		...	Allele T... decreased... warfarin
...		...	Allele A... decreased... warfarin
...		AG + GG	Genotypes AG+GG ... decreased... warfarin

Should we really load these as individual phenotypes? It seems to me it should rather be collapsed to "warfarin dosage" which would then allow better grouping together of multiple variants with the same "phenotype"

• TODO: Content team to discuss and provide feedback