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Par0001bspline08.txt
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Par0001bspline08.txt
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// Description: elastixpaper, bspline8
//ImageTypes
(FixedInternalImagePixelType "float")
(FixedImageDimension 3)
(MovingInternalImagePixelType "float")
(MovingImageDimension 3)
//Components
(Registration "MultiResolutionRegistration")
(FixedImagePyramid "FixedSmoothingImagePyramid")
(MovingImagePyramid "MovingSmoothingImagePyramid")
(Interpolator "BSplineInterpolator")
(Metric "AdvancedMattesMutualInformation")
(Optimizer "StandardGradientDescent")
(ResampleInterpolator "FinalBSplineInterpolator")
(Resampler "DefaultResampler")
(Transform "BSplineTransform")
(ErodeMask "false" )
(NumberOfResolutions 4)
(FinalGridSpacingInPhysicalUnits 8.0)
(GridSpacingSchedule 8.0 4.0 2.0 1.0)
(HowToCombineTransforms "Compose")
(WriteResultImage "false")
(WriteResultImageAfterEachResolution "false")
(WriteTransformParametersEachIteration "false")
(WriteTransformParametersEachResolution "true")
//Maximum number of iterations in each resolution level:
(MaximumNumberOfIterations 2000 )
//Number of grey level bins in each resolution level:
(NumberOfHistogramBins 32 )
(FixedLimitRangeRatio 0.0)
(MovingLimitRangeRatio 0.0)
(FixedKernelBSplineOrder 3)
(MovingKernelBSplineOrder 3)
//Number of spatial samples used to compute the mutual information in each resolution level:
(ImageSampler "RandomCoordinate")
(NumberOfSpatialSamples 2000 )
(FixedImageBSplineInterpolationOrder 1)
(UseRandomSampleRegion "true")
(SampleRegionSize 50.0)
(CheckNumberOfSamples "false")
(NewSamplesEveryIteration "true")
//Order of B-Spline interpolation used in each resolution level:
(BSplineInterpolationOrder 1)
//Order of B-Spline interpolation used for applying the final deformation:
(FinalBSplineInterpolationOrder 3)
//Default pixel value for pixels that come from outside the picture:
(DefaultPixelValue 0)
//SP: Param_a in each resolution level. a_k = a/(A+k+1)^alpha
(SP_a 2000.0 )
//SP: Param_A in each resolution level. a_k = a/(A+k+1)^alpha
(SP_A 200.0 )
//SP: Param_alpha in each resolution level. a_k = a/(A+k+1)^alpha
(SP_alpha 0.6 )