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Genomic region simulation #11

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hiruna72 opened this issue Feb 8, 2024 · 0 comments
Open

Genomic region simulation #11

hiruna72 opened this issue Feb 8, 2024 · 0 comments
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enhancement New feature or request

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@hiruna72
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hiruna72 commented Feb 8, 2024 •
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Provide an argument to pass a genomic region.
For example simulate full contig or reads for the region chr22:20,293,718-20,294,757 of the human genome.
Please note that the region should be able to given as it appears on IGV (with commas).

squigulator hg38noAlt.fa -x dna-r9-prom -o reads.blow5 -n 150000 --region chr22:20,293,718-20,294,757
@hiruna72 hiruna72 added the enhancement New feature or request label Feb 9, 2024
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