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small things needing fixing in "accelerate with automation" #30

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hwick opened this issue Mar 20, 2024 · 0 comments
Open

small things needing fixing in "accelerate with automation" #30

hwick opened this issue Mar 20, 2024 · 0 comments

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@hwick
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hwick commented Mar 20, 2024

  • positional param loop section: add explicit statement to cd raw_fastq before writing loop script

  • long exercise in positional params: for some reason all questions are labeled as "1."

  • long exercise in positional params: add a bit at the end actually instructing them to run the script

  • long exercise in positional params: formatting of exercise "click for answer" is weird in .md (but fine in .html), could consider this format which might work for both:
    <details>
    <summary markdown='span'><b>Click here for answer </b></summary>
    your text to be hidden (note: there is empty line above it)
    </details>

  • slurm array: broken awk lesson link?

  • positional params: could consider adding "advanced use positional param in loop" lesson back in if we want to flesh out (we ended an hour early)

  • positional params: Colman vs Coleman at one point

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