README.md

scfind paper figures

This repository contains scripts to recreate the figures from the scfind paper.

Required R libraries

scfind SingleCellExperiment RcolorBrewer ggplot2 ggpubr ggrepel ComplexHeatmap UpSetR scales cowplot

Fig. 1

script
keynote
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Fig. 2

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keynote
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Fig. 3

script
keynote
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Fig. 4

script
keynote
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Fig. 5

script
keynote
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Table 1

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Fig. S1

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Fig. S2

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Fig. S3

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Fig. S4

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Fig. S5

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Fig. S6

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Fig. S7

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Fig. S8

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Fig. S9

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Fig. S10

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Fig. S13

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Fig. S14

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Fig. S15

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Fig. S16

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Fig. S17

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Fig. S18

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Table S1

data_compression

Table S2

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Table S3

data_compression

Table S4

data_compression

Table S5

data_compression

Table S6

data_compression

Table S7

data_compression

Table S8

data_compression

Table S9

data_compression

Table S10

data_compression

Table S11

data_compression

Table S12

data_compression