I get This event loop is already running when combining adlfs and --autoreload

[MarcSkovMadsen]

If creating a filesystem using from adlfs import AzureBlobFileSystem. I use that filesystem to do pd.read_parquet(... filesystem=filesystem) and df.to_parquet(..., filesystem=filesystem).

When I serve my app with --autoreload I get

ERROR: This event loop is already running
Exception ignored in atexit callback: <bound method BaseServer._atexit of <panel.io.server.Server object at 0x7f70461b4cd0>>
Traceback (most recent call last):
  File "/home/jovyan/repos/mt-pm-reporting/.venv/lib/python3.11/site-packages/bokeh/server/server.py", line 290, in _atexit
    self.stop(wait=False)
  File "/home/jovyan/repos/mt-pm-reporting/.venv/lib/python3.11/site-packages/panel/io/server.py", line 354, in stop
    self._loop.asyncio_loop.run_until_complete(stop_autoreload())
  File "/opt/conda/lib/python3.11/asyncio/base_events.py", line 629, in run_until_complete
    self._check_running()
  File "/opt/conda/lib/python3.11/asyncio/base_events.py", line 588, in _check_running
    raise RuntimeError('This event loop is already running')

I believe the line self._loop.asyncio_loop.run_until_complete(stop_autoreload()) above needs to be able to handle if the loop is already running. It is already running because with autoreload the script is run one time before the server actually starts. And this runs the adlfs async functionality.

Minimum, reproducible example

panel==1.4.4, adfls=2024.4.1

• Create an Azure Blob Storage and container with the name test
• Set the environment variable export AZURE_CONNECTIONSTRING_TEST="DefaultEndpointsProtocol=https;AccountName=.."
• Run the file below python app.py to create the data
• Serve the file below panel serve app.py --autoreload --index app

import os

import pandas as pd
import panel as pn
from adlfs import AzureBlobFileSystem

azure_blob_connection_string = os.environ["AZURE_CONNECTIONSTRING_TEST"]
filesystem = AzureBlobFileSystem(connection_string=azure_blob_connection_string)

path = "test/panel_adlfs.parquet"


def read_data():
    return pd.read_parquet(path=path, engine="pyarrow", filesystem=filesystem)


def write_data():
    if filesystem.exists(path):
        filesystem.rm(path)

    df = pd.DataFrame({"x": [1, 2, 3, 4]})
    df.to_parquet(path, engine="pyarrow", filesystem=filesystem)


if __name__ == "__main__":
    write_data()
    print(read_data())
elif pn.state.served:
    data = read_data()
    pn.panel(data).servable()

The interesting thing is that if you raise an exception raise ValueError() the application will serve and show you the error. When you remove the ValueError the application will reload and work fine. I.e. the problem is that something else gets a chance to start the ioloop before Panel with autoreload.

Work Around

You can work around the problem if you make sure not to use the adfls filesystem the first time the script is executed.

import os

import pandas as pd
import panel as pn
from adlfs import AzureBlobFileSystem
   
azure_blob_connection_string = os.environ["AZURE_CONNECTIONSTRING_TEST"]
filesystem = AzureBlobFileSystem(connection_string=azure_blob_connection_string)

path = "test/panel_adlfs.parquet"


def read_data():
    return pd.read_parquet(path=path, engine="pyarrow", filesystem=filesystem)


def write_data():
    if filesystem.exists(path):
        filesystem.rm(path)

    df = pd.DataFrame({"x": [1, 2, 3, 4]})
    df.to_parquet(path, engine="pyarrow", filesystem=filesystem)

def can_load():
    if "can_load" in pn.state.cache:
        return True
    
    pn.state.cache["can_load"]=True
    return not pn.config.autoreload
    

if __name__ == "__main__":
    write_data()
    print(read_data())
elif pn.state.served:
    if not can_load():
        pn.panel("Please reload ...").servable()
    else:
        data = read_data()
        pn.panel(data).servable()

Additional Context

• Maybe related to Why is calling `sync` from a running loop a bad idea? fsspec/filesystem_spec#1570

[MarcSkovMadsen]

I've tried adding

import nest_asyncio
nest_asyncio.apply()

to the top of the script I'm serving. Then I get

2024-06-24 12:25:17,809 Exception in callback BaseAsyncIOLoop._handle_events(4, 1)
handle: <Handle BaseAsyncIOLoop._handle_events(4, 1)>
Traceback (most recent call last):
  File "/opt/conda/lib/python3.11/asyncio/events.py", line 80, in _run
    self._context.run(self._callback, *self._args)
RuntimeError: cannot enter context: <_contextvars.Context object at 0x7f2c558fb240> is already entered
2024-06-24 12:25:18,165 WebSocket connection opened
2024-06-24 12:25:18,166 ServerConnection created

[MarcSkovMadsen]

I've added a minimum, reproducible example in the top post

[MarcSkovMadsen]

You can work around the problem by not using the adfls filesystem the first time the script is executed with autoreload. I've added the minimum, reproducible example above.

[MarcSkovMadsen]

In general adlfs seems not to work great with Panel.

Below is the pyinstrument profiling where I do a pandas.read_parquet operation using the adlfs filesystem.

Executing the same function with the same arguments with python alone takes 1 second. Don't know why it takes 9 seconds to acquire a lock? And why its needed.

[philippjfr]

Don't know why it takes 9 seconds to acquire a lock? And why its needed.

It's likely not acquiring the lock that takes so long but the actual computation. Looking at threaded applications with a profiler is notoriously difficult and the profiler itself may significantly distort the results.