main_reg.py

# Copyright (c) 2015-present, Facebook, Inc.
# All rights reserved.
import argparse
import datetime
import numpy as np
import time
import torch
import torch.backends.cudnn as cudnn
import json

from pathlib import Path

from timm.data import Mixup
from timm.models import create_model
from timm.loss import LabelSmoothingCrossEntropy, SoftTargetCrossEntropy
from timm.scheduler import create_scheduler
from timm.optim import create_optimizer
from timm.utils import get_state_dict, ModelEma

# modified NativeScaler for accum_iter
# from timm.utils import NativeScaler
# from utils import NativeScaler
from utils import NativeScalerWithGradNormCount as NativeScaler

from datasets import build_dataset
from engine import train_one_epoch, evaluate
from samplers import RASampler
from augment import new_data_aug_generator

from contextlib import suppress

import models_reg
# import models_deit

import utils

# log about
import mlflow

def get_args_parser():
    parser = argparse.ArgumentParser('DeiT training and evaluation script', add_help=False)
    parser.add_argument('--batch-size', default=64, type=int)
    parser.add_argument('--epochs', default=300, type=int)
    parser.add_argument('--bce-loss', action='store_true')
    parser.add_argument('--unscale-lr', action='store_true')

    # Model parameters
    parser.add_argument('--model', default='deit_base_patch16_224', type=str, metavar='MODEL',
                        help='Name of model to train')
    parser.add_argument('--input-size', default=224, type=int, help='images input size')

    parser.add_argument('--drop', type=float, default=0.0, metavar='PCT',
                        help='Dropout rate (default: 0.)')
    parser.add_argument('--drop-path', type=float, default=0.1, metavar='PCT',
                        help='Drop path rate (default: 0.1)')
    parser.add_argument('--ssr', type=float, default=0.1, metavar='PCT',
                        help='stochastic shuffle rate (default: 0.1)')

    parser.add_argument('--model-ema', action='store_true')
    parser.add_argument('--no-model-ema', action='store_false', dest='model_ema')
    parser.set_defaults(model_ema=True)
    parser.add_argument('--model-ema-decay', type=float, default=0.99996, help='')
    parser.add_argument('--model-ema-force-cpu', action='store_true', default=False, help='')

    # Optimizer parameters
    parser.add_argument('--opt', default='adamw', type=str, metavar='OPTIMIZER',
                        help='Optimizer (default: "adamw"')
    parser.add_argument('--opt-eps', default=1e-8, type=float, metavar='EPSILON',
                        help='Optimizer Epsilon (default: 1e-8)')
    parser.add_argument('--opt-betas', default=None, type=float, nargs='+', metavar='BETA',
                        help='Optimizer Betas (default: None, use opt default)')
    parser.add_argument('--clip-grad', type=float, default=None, metavar='NORM',
                        help='Clip gradient norm (default: None, no clipping)')
    parser.add_argument('--momentum', type=float, default=0.9, metavar='M',
                        help='SGD momentum (default: 0.9)')
    parser.add_argument('--weight-decay', type=float, default=0.05,
                        help='weight decay (default: 0.05)')
    # Learning rate schedule parameters
    parser.add_argument('--sched', default='cosine', type=str, metavar='SCHEDULER',
                        help='LR scheduler (default: "cosine"')
    parser.add_argument('--lr', type=float, default=5e-4, metavar='LR',
                        help='learning rate (default: 5e-4)')
    parser.add_argument('--lr-noise', type=float, nargs='+', default=None, metavar='pct, pct',
                        help='learning rate noise on/off epoch percentages')
    parser.add_argument('--lr-noise-pct', type=float, default=0.67, metavar='PERCENT',
                        help='learning rate noise limit percent (default: 0.67)')
    parser.add_argument('--lr-noise-std', type=float, default=1.0, metavar='STDDEV',
                        help='learning rate noise std-dev (default: 1.0)')
    parser.add_argument('--warmup-lr', type=float, default=1e-6, metavar='LR',
                        help='warmup learning rate (default: 1e-6)')
    parser.add_argument('--min-lr', type=float, default=1e-5, metavar='LR',
                        help='lower lr bound for cyclic schedulers that hit 0 (1e-5)')

    parser.add_argument('--decay-epochs', type=float, default=30, metavar='N',
                        help='epoch interval to decay LR')
    parser.add_argument('--warmup-epochs', type=int, default=5, metavar='N',
                        help='epochs to warmup LR, if scheduler supports')
    parser.add_argument('--cooldown-epochs', type=int, default=10, metavar='N',
                        help='epochs to cooldown LR at min_lr, after cyclic schedule ends')
    parser.add_argument('--patience-epochs', type=int, default=10, metavar='N',
                        help='patience epochs for Plateau LR scheduler (default: 10')
    parser.add_argument('--decay-rate', '--dr', type=float, default=0.1, metavar='RATE',
                        help='LR decay rate (default: 0.1)')

    # Augmentation parameters
    parser.add_argument('--color-jitter', type=float, default=0.3, metavar='PCT',
                        help='Color jitter factor (default: 0.3)')
    parser.add_argument('--aa', type=str, default='rand-m9-mstd0.5-inc1', metavar='NAME',
                        help='Use AutoAugment policy. "v0" or "original". " + \
                             "(default: rand-m9-mstd0.5-inc1)'),
    parser.add_argument('--smoothing', type=float, default=0.1, help='Label smoothing (default: 0.1)')
    parser.add_argument('--train-interpolation', type=str, default='bicubic',
                        help='Training interpolation (random, bilinear, bicubic default: "bicubic")')

    parser.add_argument('--repeated-aug', action='store_true')
    parser.add_argument('--no-repeated-aug', action='store_false', dest='repeated_aug')
    parser.set_defaults(repeated_aug=True)
    
    parser.add_argument('--train-mode', action='store_true')
    parser.add_argument('--no-train-mode', action='store_false', dest='train_mode')
    parser.set_defaults(train_mode=True)
    
    parser.add_argument('--ThreeAugment', action='store_true') #3augment
    
    parser.add_argument('--src', action='store_true') #simple random crop
    
    # * Random Erase params
    parser.add_argument('--reprob', type=float, default=0.25, metavar='PCT',
                        help='Random erase prob (default: 0.25)')
    parser.add_argument('--remode', type=str, default='pixel',
                        help='Random erase mode (default: "pixel")')
    parser.add_argument('--recount', type=int, default=1,
                        help='Random erase count (default: 1)')
    parser.add_argument('--resplit', action='store_true', default=False,
                        help='Do not random erase first (clean) augmentation split')

    # * Mixup params
    parser.add_argument('--mixup', type=float, default=0.8,
                        help='mixup alpha, mixup enabled if > 0. (default: 0.8)')
    parser.add_argument('--cutmix', type=float, default=1.0,
                        help='cutmix alpha, cutmix enabled if > 0. (default: 1.0)')
    parser.add_argument('--cutmix-minmax', type=float, nargs='+', default=None,
                        help='cutmix min/max ratio, overrides alpha and enables cutmix if set (default: None)')
    parser.add_argument('--mixup-prob', type=float, default=1.0,
                        help='Probability of performing mixup or cutmix when either/both is enabled')
    parser.add_argument('--mixup-switch-prob', type=float, default=0.5,
                        help='Probability of switching to cutmix when both mixup and cutmix enabled')
    parser.add_argument('--mixup-mode', type=str, default='batch',
                        help='How to apply mixup/cutmix params. Per "batch", "pair", or "elem"')
    
    # * Finetuning params
    parser.add_argument('--finetune', default='', help='finetune from checkpoint')
    
    # Dataset parameters
    parser.add_argument('--data-path', default='/datasets01/imagenet_full_size/061417/', type=str,
                        help='dataset path')
    parser.add_argument('--data-set', default='IMNET', choices=['CIFAR', 'IMNET', 'INAT', 'INAT19'],
                        type=str, help='Image Net dataset path')
    parser.add_argument('--inat-category', default='name',
                        choices=['kingdom', 'phylum', 'class', 'order', 'supercategory', 'family', 'genus', 'name'],
                        type=str, help='semantic granularity')

    parser.add_argument('--output_dir', default='',
                        help='path where to save, empty for no saving')
    parser.add_argument('--device', default='cuda',
                        help='device to use for training / testing')
    parser.add_argument('--seed', default=0, type=int)
    parser.add_argument('--resume', default='', help='resume from checkpoint')
    parser.add_argument('--start_epoch', default=0, type=int, metavar='N',
                        help='start epoch')
    parser.add_argument('--eval', action='store_true', help='Perform evaluation only')
    parser.add_argument('--eval-crop-ratio', default=0.875, type=float, help="Crop ratio for evaluation")
    parser.add_argument('--dist-eval', action='store_true', default=False, help='Enabling distributed evaluation')
    parser.add_argument('--num_workers', default=10, type=int)
    parser.add_argument('--pin-mem', action='store_true',
                        help='Pin CPU memory in DataLoader for more efficient (sometimes) transfer to GPU.')
    parser.add_argument('--no-pin-mem', action='store_false', dest='pin_mem',
                        help='')
    parser.set_defaults(pin_mem=True)

    # distributed training parameters
    parser.add_argument('--distributed', action='store_true', default=False, help='Enabling distributed training')
    parser.add_argument('--local-rank', default=0, type=int)
    parser.add_argument('--world_size', default=1, type=int,
                        help='number of distributed processes')
    parser.add_argument('--dist_url', default='env://', help='url used to set up distributed training')
    
    # amp about
    parser.add_argument('--amp', default='bfloat16')
    parser.add_argument('--accum_iter', default=1, type=int,
        help='Accumulate gradient iterations for increasing effective batch size')

    return parser


def main(args):
    utils.init_distributed_mode(args)
    print(args)

    device = torch.device(args.device)

    # fix the seed for reproducibility
    seed = args.seed + utils.get_rank()
    torch.manual_seed(seed)
    np.random.seed(seed)

    cudnn.benchmark = True

    # log about
    run_name = str(args.output_dir).split("/")[-1]
    if args.local_rank == 0 and args.gpu == 0:
        mlflow.start_run(run_name=run_name)
        for key, value in vars(args).items():
            mlflow.log_param(key, value)

    dataset_train, args.nb_classes = build_dataset(is_train=True, args=args)
    dataset_val, _ = build_dataset(is_train=False, args=args)

    if args.distributed:
        num_tasks = utils.get_world_size()
        global_rank = utils.get_rank()
        if args.repeated_aug:
            sampler_train = RASampler(
                dataset_train, num_replicas=num_tasks, rank=global_rank, shuffle=True
            )
        else:
            sampler_train = torch.utils.data.DistributedSampler(
                dataset_train, num_replicas=num_tasks, rank=global_rank, shuffle=True
            )
        if args.dist_eval:
            if len(dataset_val) % num_tasks != 0:
                print('Warning: Enabling distributed evaluation with an eval dataset not divisible by process number. '
                      'This will slightly alter validation results as extra duplicate entries are added to achieve '
                      'equal num of samples per-process.')
            sampler_val = torch.utils.data.DistributedSampler(
                dataset_val, num_replicas=num_tasks, rank=global_rank, shuffle=False)
        else:
            sampler_val = torch.utils.data.SequentialSampler(dataset_val)
    else:
        sampler_train = torch.utils.data.RandomSampler(dataset_train)
        sampler_val = torch.utils.data.SequentialSampler(dataset_val)

    data_loader_train = torch.utils.data.DataLoader(
        dataset_train, sampler=sampler_train,
        batch_size=args.batch_size,
        num_workers=args.num_workers,
        pin_memory=args.pin_mem,
        drop_last=True,
    )
    if args.ThreeAugment:
        data_loader_train.dataset.transform = new_data_aug_generator(args)

    data_loader_val = torch.utils.data.DataLoader(
        dataset_val, sampler=sampler_val,
        batch_size=args.batch_size,
        num_workers=args.num_workers,
        pin_memory=args.pin_mem,
        drop_last=False
    )

    mixup_fn = None
    mixup_active = args.mixup > 0 or args.cutmix > 0. or args.cutmix_minmax is not None
    if mixup_active:
        mixup_fn = Mixup(
            mixup_alpha=args.mixup, cutmix_alpha=args.cutmix, cutmix_minmax=args.cutmix_minmax,
            prob=args.mixup_prob, switch_prob=args.mixup_switch_prob, mode=args.mixup_mode,
            label_smoothing=args.smoothing, num_classes=args.nb_classes)

    print(f"Creating model: {args.model}")
    model = create_model(
        args.model,
        pretrained=False,
        num_classes=args.nb_classes,
        drop_rate=args.drop,
        drop_path_rate=args.drop_path,
        shuffle_rate=args.ssr,
        drop_block_rate=None,
        img_size=args.input_size
    )
             
    if args.finetune:
        if args.finetune.startswith('https'):
            checkpoint = torch.hub.load_state_dict_from_url(
                args.finetune, map_location='cpu', check_hash=True)
        else:
            checkpoint = torch.load(args.finetune, map_location='cpu')

        checkpoint_model = checkpoint['model']
        state_dict = model.state_dict()
        for k in ['head.weight', 'head.bias', 'cls_token', 'pos_embed_cls',
                  'neck.weight', 'norm_neck.weight']:
            if k in checkpoint_model and checkpoint_model[k].shape != state_dict[k].shape:
                print(f"Removing key {k} from pretrained checkpoint")
                del checkpoint_model[k]
        
        # interpolate position embedding
        pos_embed_checkpoint = checkpoint_model['pos_embed']
        embedding_size = pos_embed_checkpoint.shape[-1]
        num_patches = model.patch_embed.num_patches
        num_extra_tokens = model.pos_embed.shape[-2] - num_patches
        # height (== width) for the checkpoint position embedding
        orig_size = int((pos_embed_checkpoint.shape[-2] - num_extra_tokens) ** 0.5)
        # height (== width) for the new position embedding
        new_size = int(num_patches ** 0.5)
        # class_token and dist_token are kept unchanged
        extra_tokens = pos_embed_checkpoint[:, :num_extra_tokens]
        # only the position tokens are interpolated
        pos_tokens = pos_embed_checkpoint[:, num_extra_tokens:]
        pos_tokens = pos_tokens.reshape(-1, orig_size, orig_size, embedding_size).permute(0, 3, 1, 2)
        pos_tokens = torch.nn.functional.interpolate(
            pos_tokens, size=(new_size, new_size), mode='bicubic', align_corners=False)
        pos_tokens = pos_tokens.permute(0, 2, 3, 1).flatten(1, 2)
        new_pos_embed = torch.cat((extra_tokens, pos_tokens), dim=1)
        checkpoint_model['pos_embed'] = new_pos_embed

        model.load_state_dict(checkpoint_model, strict=False)
            
    model.to(device)

    model_ema = None
    if args.model_ema:
        # Important to create EMA model after cuda(), DP wrapper, and AMP but before SyncBN and DDP wrapper
        model_ema = ModelEma(
            model,
            decay=args.model_ema_decay,
            device='cpu' if args.model_ema_force_cpu else '',
            resume='')

    model_without_ddp = model
    if args.distributed:
        model = torch.nn.parallel.DistributedDataParallel(model, device_ids=[args.gpu])
        model_without_ddp = model.module
    n_parameters = sum(p.numel() for p in model.parameters() if p.requires_grad)
    print('number of params:', n_parameters)

    eff_batch_size = args.batch_size * args.accum_iter * utils.get_world_size()

    if not args.unscale_lr:
        linear_scaled_lr = args.lr * eff_batch_size / 512.0
        args.lr = linear_scaled_lr
    
    optimizer = create_optimizer(args, model_without_ddp)
    
    # amp about
    if not args.amp:
        amp_autocast = suppress()
        loss_scaler = "none"
    else:
        loss_scaler = NativeScaler()
        if args.amp == "bfloat16":
            amp_autocast = torch.cuda.amp.autocast(dtype=torch.bfloat16)
        else:
            amp_autocast = torch.cuda.amp.autocast()
        
    lr_scheduler, _ = create_scheduler(args, optimizer)

    criterion = LabelSmoothingCrossEntropy()

    if mixup_active:
        # smoothing is handled with mixup label transform
        criterion = SoftTargetCrossEntropy()
    elif args.smoothing:
        criterion = LabelSmoothingCrossEntropy(smoothing=args.smoothing)
    else:
        criterion = torch.nn.CrossEntropyLoss()
        
    if args.bce_loss:
        criterion = torch.nn.BCEWithLogitsLoss()

    output_dir = Path(args.output_dir)
    if args.resume:
        if args.resume.startswith('https'):
            checkpoint = torch.hub.load_state_dict_from_url(
                args.resume, map_location='cpu', check_hash=True)
        else:
            checkpoint = torch.load(args.resume, map_location='cpu')
        model_without_ddp.load_state_dict(checkpoint['model'])
        if not args.eval and 'optimizer' in checkpoint and 'lr_scheduler' in checkpoint and 'epoch' in checkpoint:
            optimizer.load_state_dict(checkpoint['optimizer'])
            lr_scheduler.load_state_dict(checkpoint['lr_scheduler'])
            args.start_epoch = checkpoint['epoch'] + 1
            if args.model_ema:
                utils._load_checkpoint_for_ema(model_ema, checkpoint['model_ema'])
            if 'scaler' in checkpoint and args.amp: # change loss_scaler if not amp
                loss_scaler.load_state_dict(checkpoint['scaler'])
            elif 'scaler' in checkpoint and not args.amp:
                loss_scaler = 'none'
        lr_scheduler.step(args.start_epoch)
        
    if args.eval:
        test_stats = evaluate(data_loader_val, model, device, amp_autocast)
        print(f"Accuracy of the network on the {len(dataset_val)} test images: {test_stats['acc1']:.1f}%")
        return
    
    # log about
    if args.local_rank == 0 and args.gpu == 0:
        mlflow.log_param("n_parameters", n_parameters)

    print(f"Start training for {args.epochs} epochs")
    start_time = time.time()
    max_accuracy = 0.0
    for epoch in range(args.start_epoch, args.epochs):
        if args.distributed:
            data_loader_train.sampler.set_epoch(epoch)

        train_stats = train_one_epoch(
            model, criterion, data_loader_train,
            optimizer, device, epoch, loss_scaler, amp_autocast,
            args.clip_grad, model_ema, mixup_fn,
            set_training_mode=args.train_mode,  # keep in eval mode for deit finetuning / train mode for training and deit III finetuning
            args=args,
        )

        lr_scheduler.step(epoch)
        if args.output_dir:
            checkpoint_paths = [output_dir / 'checkpoint.pth']
            for checkpoint_path in checkpoint_paths:
                utils.save_on_master({
                    'model': model_without_ddp.state_dict(),
                    'optimizer': optimizer.state_dict(),
                    'lr_scheduler': lr_scheduler.state_dict(),
                    'epoch': epoch,
                    'model_ema': get_state_dict(model_ema) if args.model_ema else None,
                    'scaler': loss_scaler.state_dict() if loss_scaler != 'none' else loss_scaler,
                    'args': args,
                }, checkpoint_path)
             

        test_stats = evaluate(data_loader_val, model, device, amp_autocast)
        print(f"Accuracy of the network on the {len(dataset_val)} test images: {test_stats['acc1']:.1f}%")
        
        if max_accuracy < test_stats["acc1"]:
            max_accuracy = test_stats["acc1"]
            if args.output_dir:
                checkpoint_paths = [output_dir / 'best_checkpoint.pth']
                for checkpoint_path in checkpoint_paths:
                    utils.save_on_master({
                        'model': model_without_ddp.state_dict(),
                        'optimizer': optimizer.state_dict(),
                        'lr_scheduler': lr_scheduler.state_dict(),
                        'epoch': epoch,
                        'model_ema': get_state_dict(model_ema) if args.model_ema else None,
                        'scaler': loss_scaler.state_dict() if loss_scaler != 'none' else loss_scaler,
                        'args': args,
                    }, checkpoint_path)
            
        print(f'Max accuracy: {max_accuracy:.2f}%')

        log_stats = {**{f'train_{k}': v for k, v in train_stats.items()},
                     **{f'test_{k}': v for k, v in test_stats.items()},
                     'epoch': epoch,
                     'n_parameters': n_parameters}
        
        # log about
        if args.local_rank == 0 and args.gpu == 0:
            for key, value in log_stats.items():
                mlflow.log_metric(key, value, log_stats['epoch'])       
        
        if args.output_dir and utils.is_main_process():
            with (output_dir / "log.txt").open("a") as f:
                f.write(json.dumps(log_stats) + "\n")

    total_time = time.time() - start_time
    total_time_str = str(datetime.timedelta(seconds=int(total_time)))
    print('Training time {}'.format(total_time_str))


if __name__ == '__main__':
    parser = argparse.ArgumentParser('DeiT training and evaluation script', parents=[get_args_parser()])
    args = parser.parse_args()

    if args.output_dir:
        Path(args.output_dir).mkdir(parents=True, exist_ok=True)
    main(args)