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Segmentation fault core dumped on large genome #15

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pan-genome opened this issue Sep 30, 2020 · 1 comment
Open

Segmentation fault core dumped on large genome #15

pan-genome opened this issue Sep 30, 2020 · 1 comment

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@pan-genome
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in one of the closed issue says the Seg fault issue is fixed on v2.5 but I am still getting it on a 14gb genome:
pblat -threads=6 -noHead -fastMap -tileSize=12 -ooc=4461.ooc -minScore=100 -minIdentity=98 source.fa chunk_08.fa chunk_08.fa.psl
Loaded 14547261565 letters in 22 sequences
Segmentation fault (core dumped)
@liaochen1988
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I had exactly the same problem.

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@liaochen1988 @pan-genome