pyproject.toml

[project]
name = "fals"
version = "0.1.0"
description = "Code to reproduce figures"
requires-python = ">=3.11"

[build-system]
build-backend = "hatchling.build"
requires = ["hatchling"]

[tool.pixi.project]
channels = ["conda-forge"]
platforms = ["osx-arm64", "linux-64"]

[tool.pixi.pypi-dependencies]
fals = { path = ".", editable = true }

[tool.pixi.tasks]

[tool.pixi.dependencies]
boto3 = "<2.0"
duckdb = ">=1.0"
jupyter = ">=1.1"
jupyterlab = ">=4.3"
numpy = ">=2.0"
pandas = ">=2.0"
pyarrow = "18.0.0"
redun = ">=0.22"
s3fs = ">=2024.10"
scanpy = ">=1.10"
scikit-learn = ">=1.5"
seaborn = ">=0.13"
statsmodels = ">=0.14"

[project.optional-dependencies]
dev = ["ruff"]

[tool.ruff]
line-length = 99

[tool.ruff.lint]
exclude = [
    "notebooks/*"
]
ignore = [
    "E203",
    "E701",
    "E731",
]
select = [
    "C90", # mccabe
    "E", # pycodestyle
    "F", # pyflakes
    "I", # isort
    "W", # pycodestyle
    "RUF100", # unnecessary noqa
    "TID251", # banned imports
    "TID252", # no relative imports
]