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Positional probabilities of amino acids in denovo peptide predictions #35

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ayavinash opened this issue Apr 16, 2024 · 1 comment
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@ayavinash
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Hi, thanks for releasing Instanovo. I tried denovo predictions on my own data and and received the output csv. It contains only sequence and peptide probability. Could you please let us know, how can we get the positional probability of each predicted amino acids in peptide sequence? Thanks.

@irleader
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I am also wondering, the log pobability is natural log or log 10 based? I would like to trasnform the log probaility back to probability.

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