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Well with the configuration in place it would mislead people as to the minimum of what they have to do. I can appreciate the thing being as if there is no configuration in place. In that case, src_files should also be represented. Because of the inconsistency between src_files and output_file in the output command I think it just struck me as a bit off.
Expected
pyproject.toml
output command is
pip-compile
Actual
very low prio
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