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Manages dockerfiles and related images available for use with OTTR

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ottr_docker

This repository stores the Dockerfiles and associated files for images that can be used by OTTR for rendering (or other items underneath the hood).

How to use

In your OTTR repositories, you can specify a different docker image for rendering in the config_automation.yml file.

Currently the only supported docker images for rendering purposes are base_ottr and bioconductor.

Read more about docker customization on ottrproject.org.

To rebuild an image:

Go to Actions > Manual build of docker image > Run workflow

For directory, put the directory/docker image name that you'd like to rebuild. e.g. "base_ottr"

For tag, put the full name of the docker image as it is called on dockerhub. e.g. "jhudsl/base_ottr:main"

For "Push to Dockerhub" either put "true" if you'd like to push to dockerhub or "false" if you just want to test the build but not push it.

Example of a docker image manual rebuild settings:

Screen Shot 2023-02-28 at 2 34 23 PM

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Manages dockerfiles and related images available for use with OTTR

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