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GenerateModuleDoc.py
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GenerateModuleDoc.py
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###############################################################################
##
## Copyright (C) 2010-2012, USGS Fort Collins Science Center.
## All rights reserved.
## Contact: talbertc@usgs.gov
##
## This file is part of the Software for Assisted Habitat Modeling package
## for VisTrails.
##
## "Redistribution and use in source and binary forms, with or without
## modification, are permitted provided that the following conditions are met:
##
## - Redistributions of source code must retain the above copyright notice,
## this list of conditions and the following disclaimer.
## - Redistributions in binary form must reproduce the above copyright
## notice, this list of conditions and the following disclaimer in the
## documentation and/or other materials provided with the distribution.
## - Neither the name of the University of Utah nor the names of its
## contributors may be used to endorse or promote products derived from
## this software without specific prior written permission.
##
## THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
## AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
## THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
## PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
## CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
## EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
## PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
## OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
## WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
## OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
## ADVISED OF THE POSSIBILITY OF SUCH DAMAGE."
##
## Although this program has been used by the U.S. Geological Survey (USGS),
## no warranty, expressed or implied, is made by the USGS or the
## U.S. Government as to the accuracy and functioning of the program and
## related program material nor shall the fact of distribution constitute
## any such warranty, and no responsibility is assumed by the USGS
## in connection therewith.
##
## Any use of trade, firm, or product names is for descriptive purposes only
## and does not imply endorsement by the U.S. Government.
###############################################################################
'''
Due to the complexity of the documentation we wish to provide to the
SAHM package users it became necessary to store our module and port
level documentation in an external xml file.
This file is arranged in a specific manner with detailed information about
each of our modules, the input and output ports, options, defaults, requirements
references, etc.
'''
from xml.etree import ElementTree as ET
import textwrap
textwidth = 100
def load_documentation(xml_file):
global doc_tree
doc_tree = ET.parse(xml_file)
# doc_tree = xml.dom.minidom.parse(xml_file)
# global nodes
# nodes = {}
# module_nodes = doc_tree.getElementsByTagName("Module")
# for module_node in module_nodes:
# title = module_node.getElementsByTagName("Title")
# nodes[title[0].firstChild.data] = module_node
def construct_module_doc(module_name):
global doc_tree
for elem in doc_tree.findall("Module"):
title = elem.find("Title")
if title.text == module_name:
title = elem.find("Title")
description = elem.find("Description")
doc_string = module_name + "\n\n"
doc_string += "Description:\n" + cleanupstring(description.text, 8, 4) + "\n\n"
doc_string += constructInPortsText(elem)
doc_string += constructOutPortsText(elem)
doc_string += constructRefs(elem)
return doc_string
def construct_port_doc(cls, port_name, direction):
global doc_tree
for elem in doc_tree.findall("Module"):
title = elem.find("Title")
if title.text == cls.__name__:
if direction == "in":
ports = elem.findall("InputPorts/Port")
else:
ports = elem.findall("OutputPorts/Port")
for port in ports:
name = port.find("PortName").text
if name == port_name:
return construct_port_msg(port, 0)
def constructInPortsText(module):
inports = module.findall("InputPorts/Port")
portsText = "Input Ports:\n"
if not inports:
portsText += " None\n\n"
return portsText
for port in inports:
portsText += construct_port_msg(port, 8) + "\n\n"
return portsText
def constructOutPortsText(module):
outports = module.findall("OutputPorts/Port")
portsText = "Output Ports:\n"
if not outports:
portsText += " None"
return portsText
for port in outports:
portsText += construct_port_msg(port, 8) + "\n\n"
return portsText
def constructRefs(module):
refs = module.findall("References/Reference")
refsText = "References:\n"
if not refs:
return ""
else:
refsText = "References:"
for ref in refs:
cleanref = cleanupstring(ref.text, 0, 8)
refsText += "\n\n " + cleanref
return refsText
def construct_port_msg(port, indent):
nl = "\n" + " "*indent
Portname = port.find("PortName").text
Definition = cleanupstring(port.find("Definition").text, indent, indent)
Mandatory = port.find("Mandatory").text
Default = port.find("Default").text
Options = port.findall("Options/Option")
Connections = port.findall("Connections/Connection")
msg = " "*(indent -4) + Portname + ": "
if Mandatory.lower() == "true":
msg += "(mandatory)"
elif Mandatory.lower() == "false":
msg += "(optional)"
":"
msg += "\n" + Definition
if Default != "NA":
msg += nl + nl + "Default value = " + Default
if Options:
msg += nl + "Options are:"
for Option in Options:
msg += "\n" + cleanupstring(Option.text, indent+4, indent+12)
if Connections:
msg += nl +nl + "Common connections:"
for Connection in Connections:
msg += "\n"+ cleanupstring(Connection.text, indent+4, indent+12)
return msg
def cleanupstring(str, indent1, indent2):
if str is None:
return ""
lines = str.split("\n")
cleanstr = ""
for line in lines:
cleanstr += textwrap.fill(line, initial_indent=' '*indent1, subsequent_indent=' '*indent2, width = textwidth) +"\n"
# str = textwrap.dedent(str)
cleanstr = cleanstr[:-1]
return cleanstr