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redux.yml
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/
redux.yml
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name: redux
channels:
- r
- bioconda
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=1_gnu
- _r-mutex=1.0.1=anacondar_1
- bam2fasta=1.0.8=pyh3252c3a_0
- binutils_impl_linux-64=2.31.1=h6176602_1
- binutils_linux-64=2.31.1=h6176602_9
- blas=1.0=mkl
- boost=1.70.0=py38h9de70de_1
- boost-cpp=1.70.0=ha2d47e9_1
- bwa=0.7.17=hed695b0_7
- bwidget=1.9.14=ha770c72_0
- bz2file=0.98=py_0
- bzip2=1.0.8=h516909a_3
- c-ares=1.16.1=h516909a_3
- ca-certificates=2020.11.8=ha878542_0
- cairo=1.14.12=h8948797_3
- certifi=2020.11.8=py38h06a4308_0
- cffi=1.14.3=py38he30daa8_0
- curl=7.71.1=he644dc0_8
- cycler=0.10.0=py38_0
- dbus=1.13.18=hb2f20db_0
- deprecation=2.1.0=pyh9f0ad1d_0
- dill=0.3.3=pyhd8ed1ab_0
- expat=2.2.10=he6710b0_2
- fastp=0.20.1=h8b12597_0
- flash=1.2.11=hed695b0_5
- fontconfig=2.13.0=h9420a91_0
- freetype=2.10.4=h5ab3b9f_0
- fribidi=1.0.10=h36c2ea0_0
- gawk=5.1.0=h516909a_0
- gcc_impl_linux-64=7.3.0=habb00fd_1
- gcc_linux-64=7.3.0=h553295d_9
- gettext=0.19.8.1=h9b4dc7a_1
- gfortran_impl_linux-64=7.3.0=hdf63c60_1
- gfortran_linux-64=7.3.0=h553295d_9
- glib=2.66.1=h92f7085_0
- graphite2=1.3.13=h58526e2_1001
- gsl=2.4=h14c3975_4
- gst-plugins-base=1.14.0=hbbd80ab_1
- gstreamer=1.14.0=hb31296c_0
- gxx_impl_linux-64=7.3.0=hdf63c60_1
- gxx_linux-64=7.3.0=h553295d_9
- harfbuzz=2.4.0=hca77d97_0
- htslib=1.11=hd3b49d5_1
- icu=58.2=he6710b0_3
- intel-openmp=2020.2=254
- jpeg=9b=h024ee3a_2
- kiwisolver=1.3.0=py38h2531618_0
- kmc=3.1.2rc1=h2d02072_0
- krb5=1.17.1=hfafb76e_3
- lcms2=2.11=h396b838_0
- ld_impl_linux-64=2.33.1=h53a641e_7
- libcurl=7.71.1=hcdd3856_8
- libdeflate=1.6=h516909a_0
- libedit=3.1.20191231=h14c3975_1
- libev=4.33=h516909a_1
- libffi=3.3=he6710b0_2
- libgcc-ng=9.3.0=h5dbcf3e_17
- libgfortran-ng=7.5.0=hae1eefd_17
- libgfortran4=7.5.0=hae1eefd_17
- libgomp=9.3.0=h5dbcf3e_17
- libiconv=1.16=h516909a_0
- libidn2=2.3.0=h516909a_0
- libnghttp2=1.41.0=h8cfc5f6_2
- libpng=1.6.37=hbc83047_0
- libssh2=1.9.0=hab1572f_5
- libstdcxx-ng=9.3.0=h2ae2ef3_17
- libtiff=4.1.0=h2733197_1
- libunistring=0.9.10=h14c3975_0
- libuuid=1.0.3=h1bed415_2
- libxcb=1.14=h7b6447c_0
- libxml2=2.9.10=hb55368b_3
- lighter=1.1.2=he513fc3_2
- llvm-openmp=8.0.1=hc9558a2_0
- lz4-c=1.9.2=heb0550a_3
- make=4.3=hd18ef5c_1
- matplotlib=3.3.2=0
- matplotlib-base=3.3.2=py38h817c723_0
- megahit=1.2.9=h8b12597_0
- mkl=2020.2=256
- mkl-service=2.3.0=py38he904b0f_0
- mkl_fft=1.2.0=py38h23d657b_0
- mkl_random=1.1.1=py38h0573a6f_0
- mmseqs2=12.113e3=h2d02072_0
- multiprocess=0.70.11.1=py38h25fe258_0
- ncurses=6.2=he6710b0_1
- numpy=1.19.2=py38h54aff64_0
- numpy-base=1.19.2=py38hfa32c7d_0
- olefile=0.46=py_0
- openjdk=11.0.1=h516909a_1016
- openmp=8.0.1=0
- openssl=1.1.1h=h516909a_0
- packaging=20.4=pyh9f0ad1d_0
- pango=1.45.3=hd140c19_0
- pathos=0.2.7=pyhd3deb0d_0
- pcre=8.44=he6710b0_0
- perl=5.26.2=h36c2ea0_1008
- perl-file-spec=3.48_01=pl526_1
- perl-findbin=1.51=pl526_2
- pigz=2.3.4=hed695b0_1
- pillow=8.0.1=py38he98fc37_0
- pilon=1.23=2
- pip=20.2.4=py38h06a4308_0
- pixman=0.40.0=h36c2ea0_0
- plass=4.687d7=h2d02072_0
- pox=0.2.9=pyhd3deb0d_0
- ppft=1.6.6.3=pyhd3deb0d_0
- prodigal=2.6.3=h516909a_2
- pycparser=2.20=pyh9f0ad1d_2
- pyparsing=2.4.7=py_0
- pyqt=5.9.2=py38h05f1152_4
- pysam=0.16.0.1=py38hbdc2ae9_1
- python=3.8.5=h7579374_1
- python-dateutil=2.8.1=py_0
- python_abi=3.8=1_cp38
- qt=5.9.7=h5867ecd_1
- r-abind=1.4_5=r36h6115d3f_1003
- r-assertthat=0.2.1=r36h6115d3f_2
- r-backports=1.2.0=r36h9e2df91_0
- r-base=3.6.1=haffb61f_2
- r-boot=1.3_25=r36h6115d3f_1
- r-broom=0.7.2=r36h142f84f_0
- r-car=3.0_10=r36h6115d3f_0
- r-cardata=3.0_4=r36h6115d3f_0
- r-cellranger=1.1.0=r36h6115d3f_1003
- r-cli=2.1.0=r36h142f84f_0
- r-clipr=0.7.1=r36h142f84f_0
- r-colorspace=1.4_1=r36h96ca727_0
- r-corrplot=0.84=r36_1003
- r-cowplot=1.1.0=r36h6115d3f_0
- r-cpp11=0.2.3=r36h142f84f_1
- r-crayon=1.3.4=r36h6115d3f_1003
- r-curl=4.3=r36hcdcec82_1
- r-data.table=1.13.2=r36h0eb13af_0
- r-dichromat=2.0_0=r36h6115d3f_4
- r-digest=0.6.27=r36h1b71b39_0
- r-dplyr=1.0.2=r36h0357c0b_0
- r-egg=0.4.5=r36h6115d3f_2
- r-ellipsis=0.3.1=r36hcdcec82_0
- r-fansi=0.4.1=r36hcdcec82_1
- r-forcats=0.5.0=r36h6115d3f_1
- r-foreign=0.8_71=r36h96ca727_0
- r-generics=0.1.0=r36hc72bb7e_0
- r-ggplot2=3.1.1=r36h6115d3f_0
- r-ggpubr=0.4.0=r36h6115d3f_0
- r-ggrepel=0.8.2=r36h0357c0b_1
- r-ggsci=2.9=r36h6115d3f_1003
- r-ggsignif=0.6.0=r36h6115d3f_1
- r-glue=1.4.2=r36hcdcec82_0
- r-gridextra=2.3=r36h6115d3f_1003
- r-gridgraphics=0.5_0=r36h6115d3f_1
- r-gtable=0.3.0=r36h6115d3f_0
- r-haven=2.3.1=r36hde08347_0
- r-hms=0.5.3=r36h6115d3f_1
- r-labeling=0.3=r36h6115d3f_4
- r-lattice=0.20_38=r36h96ca727_0
- r-lazyeval=0.2.2=r36h96ca727_0
- r-lifecycle=0.2.0=r36h6115d3f_1
- r-lme4=1.1_26=r36h03ef668_0
- r-magrittr=1.5=r36h6115d3f_1003
- r-maptools=1.0_2=r36hcdcec82_0
- r-mass=7.3_51.3=r36h96ca727_0
- r-matrix=1.2_17=r36h96ca727_0
- r-matrixmodels=0.4_1=r36h6115d3f_1003
- r-mgcv=1.8_28=r36h96ca727_0
- r-minqa=1.2.4=r36h43222d4_1006
- r-munsell=0.5.0=r36h6115d3f_0
- r-nlme=3.1_139=r36ha65eedd_0
- r-nloptr=1.2.2.2=r36h0357c0b_0
- r-nnet=7.3_14=r36hcdcec82_1
- r-openxlsx=4.2.3=r36h1b71b39_0
- r-pbkrtest=0.4_8.6=r36h6115d3f_0
- r-pillar=1.4.6=r36h6115d3f_0
- r-pkgconfig=2.0.3=r36h6115d3f_1
- r-plyr=1.8.4=r36h29659fb_0
- r-polynom=1.4_0=r36h6115d3f_2
- r-prettyunits=1.1.1=r36h6115d3f_1
- r-progress=1.2.2=r36h6115d3f_2
- r-purrr=0.3.4=r36hcdcec82_1
- r-quantreg=5.38=r36ha65eedd_0
- r-r6=2.5.0=r36hc72bb7e_0
- r-rcolorbrewer=1.1_2=r36h6115d3f_0
- r-rcpp=1.0.1=r36h29659fb_0
- r-rcppeigen=0.3.3.7.0=r36h0357c0b_1
- r-readr=1.4.0=r36h1b71b39_0
- r-readxl=1.3.1=r36hde08347_4
- r-rematch=1.0.1=r36h6115d3f_1003
- r-reshape=0.8.8=r36h6115d3f_0
- r-reshape2=1.4.3=r36h29659fb_0
- r-rio=0.5.16=r36h6115d3f_1002
- r-rlang=0.4.8=r36h9e2df91_0
- r-rstatix=0.6.0=r36h6115d3f_0
- r-scales=1.0.0=r36h29659fb_0
- r-sp=1.4_2=r36hcdcec82_0
- r-sparsem=1.78=r36h31ca83e_2
- r-statmod=1.4.35=r36h6e990d7_1
- r-stringi=1.4.3=r36h29659fb_0
- r-stringr=1.4.0=r36h6115d3f_0
- r-tibble=3.0.4=r36h0eb13af_0
- r-tidyr=1.1.2=r36h0357c0b_0
- r-tidyselect=1.1.0=r36h6115d3f_0
- r-utf8=1.1.4=r36hcdcec82_1003
- r-vctrs=0.3.4=r36hcdcec82_0
- r-viridislite=0.3.0=r36h6115d3f_0
- r-withr=2.1.2=r36h6115d3f_0
- r-zeallot=0.1.0=r36h6115d3f_1002
- r-zip=2.1.1=r36hcdcec82_0
- readline=8.0=h7b6447c_0
- samclip=0.4.0=0
- samtools=1.11=h6270b1f_0
- screed=1.0.4=py_0
- seqtk=1.3=hed695b0_2
- setuptools=50.3.1=py38h06a4308_1
- shovill=1.1.0=0
- sip=4.19.13=py38he6710b0_0
- six=1.15.0=py_0
- skesa=2.4.0=he1c1bb9_0
- sourmash=3.5.0=0
- sourmash-minimal=3.5.0=py38h1e0a361_1
- spades=3.14.1=h2d02072_0
- sqlite=3.33.0=h62c20be_0
- tk=8.6.10=hbc83047_0
- tktable=2.10=hb7b940f_3
- tornado=6.0.4=py38h7b6447c_1
- tqdm=4.51.0=pyh9f0ad1d_0
- trimmomatic=0.39=1
- velvet=1.2.10=hed695b0_3
- wget=1.20.1=h22169c7_0
- wheel=0.35.1=py_0
- xz=5.2.5=h7b6447c_0
- zlib=1.2.11=h516909a_1010
- zstd=1.4.5=h9ceee32_0
- pip:
- bokeh==2.2.3
- chardet==3.0.4
- click==7.1.2
- cloudpickle==1.6.0
- colorcet==2.0.2
- dask==2.30.0
- dataclasses==0.6
- datashader==0.11.1
- datashape==0.5.2
- distributed==2.30.1
- fsspec==0.8.4
- future==0.18.2
- heapdict==1.0.1
- holoviews==1.13.5
- idna==2.10
- implicit==0.4.4
- jinja2==2.11.2
- joblib==0.17.0
- llvmlite==0.34.0
- locket==0.2.0
- markdown==3.3.3
- markupsafe==1.1.1
- msgpack==1.0.0
- multipledispatch==0.6.0
- numba==0.51.2
- pandas==1.1.4
- panel==0.10.1
- param==1.10.0
- partd==1.1.0
- psutil==5.7.3
- pyct==0.4.6
- pytz==2020.4
- pyviz-comms==0.7.6
- pyyaml==5.3.1
- requests==2.24.0
- scikit-learn==0.23.2
- scipy==1.5.4
- sortedcontainers==2.3.0
- tblib==1.7.0
- threadpoolctl==2.1.0
- toolz==0.11.1
- torch==1.7.0
- typing-extensions==3.7.4.3
- umap==0.1.1
- umap-learn==0.4.6
- urllib3==1.25.11
- xarray==0.16.1
- zict==2.0.0
prefix: /homes/brauerei2/johann/miniconda3/envs/redux