test.yml

name: KBase Workspace tests

on:
  pull_request:
    types:
    - opened
    - reopened
    - synchronize
    - ready_for_review
  push:
    # run workflow when merging to main or develop
    branches:
      - main
      - master
      - develop

# TODO find out what minio ver we're using in CI / appdev / prod and use that
# TODO split tests into mongo related & non mongo related. Run the former once.
jobs:

  workspace_container_tests:
    runs-on: ubuntu-20.04
    steps:
      - uses: actions/checkout@v3

      - name: Set up Python 3.10
        uses: actions/setup-python@v3
        with:
          python-version: "3.10"

      - name: Install dependencies and set up test config
        shell: bash
        run: |
          # set up python dependencies
          pip install pytest requests

      - name: Run tests
        shell: bash
        run: |
          sh test/run_tests.sh

  workspace_deluxe_tests:
    runs-on: ubuntu-latest
    strategy:
      fail-fast: false
      matrix:
        include:
          - java: '8'  # needs to be compatible so jars can be used w/ java 8
            mongo: 'mongodb-linux-x86_64-ubuntu2204-7.0.4'
            minio: '2019-05-23T00-29-34Z'
            wired_tiger: 'true'
            gradle_test: 'testQuick'
          # the current production setup
          - java: '11'
            mongo: 'mongodb-linux-x86_64-3.6.13'
            minio: '2019-05-23T00-29-34Z'
            wired_tiger: 'false'
            gradle_test: 'testQuick'
    steps:
      - uses: actions/checkout@v3

      - name: Set up java
        uses: actions/setup-java@v3
        with:
          distribution: 'temurin'
          java-version: ${{matrix.java}}

      - name: Set up Python 3.7  # sample service is on 3.7, handle service is on sdkbase2.latest
        uses: actions/setup-python@v3
        with:
          python-version: "3.7"

      - name: Install dependencies and set up test config
        shell: bash
        run: |
          export HOMEDIR=`pwd`

          # set up python dependencies
          cd python_dependencies
          pip install pipenv
          pipenv sync --system
          cd ..

          # move to parent dir of homedir to install binaries etc
          cd ..

          # set up arango
          export ARANGODB_VER=3.9.1
          export ARANGODB_V=39
          curl -O https://download.arangodb.com/arangodb$ARANGODB_V/Community/Linux/arangodb3-linux-$ARANGODB_VER.tar.gz
          tar -xf arangodb3-linux-$ARANGODB_VER.tar.gz
          export ARANGO_EXE=$(pwd)/arangodb3-linux-$ARANGODB_VER/bin/arangod
          export ARANGO_JS=$(pwd)/arangodb3-linux-$ARANGODB_VER/usr/share/arangodb3/js/

           # set up handle service
          export HS_COMMIT=08e18379817e16db920501b66ba62b66598f506c
          export LOG_COMMIT=b549c557e3c519e0a55eadf7863a93db25cd6806
          git clone https://github.com/kbase/handle_service2.git
          cd handle_service2/
          git checkout $HS_COMMIT
          sudo chmod -R 777 .
          cd lib/
          mkdir biokbase
          cd biokbase/
          wget https://raw.githubusercontent.com/kbase/sdkbase2/$LOG_COMMIT/log.py
          cd ..
          export HSDIR=`pwd`
          cd ../..

          # set up sample service
          export SAMPLE_COMMIT=6813fb148e95db2b11db6eea04f4d1d45cbb7119
          git clone https://github.com/kbase/sample_service.git
          cd sample_service
          git checkout $SAMPLE_COMMIT
          cd lib
          export SAMPLE_DIR=`pwd`
          cd ../..

          # set up blobstore
          wget -q -O blobstore https://github.com/kbase/blobstore/releases/download/v0.1.2/blobstore_linux_amd64
          chmod a+x blobstore
          export BLOBEXE=$(pwd)/blobstore

          # set up mongo
          wget -q http://fastdl.mongodb.org/linux/${{matrix.mongo}}.tgz
          tar xfz ${{matrix.mongo}}.tgz
          export MONGOD=`pwd`/${{matrix.mongo}}/bin/mongod

          # set up minio
          export MINIO=$HOMEDIR/test_dependencies/minio/${{matrix.minio}}/minio
          gunzip $MINIO.gz 
          chmod a+x $MINIO

          # set up test config
          cd $HOMEDIR
          cp -n test.cfg.example test.cfg
          sed -i "s#^test.temp.dir =.*#test.temp.dir=temp_test_dir#" test.cfg
          sed -i "s#^test.mongo.exe.*#test.mongo.exe=$MONGOD#" test.cfg
          sed -i "s#^test.minio.exe.*#test.minio.exe=$MINIO#" test.cfg
          sed -i "s#^test.mongo.useWiredTiger.*#test.mongo.useWiredTiger=${{matrix.wired_tiger}}#" test.cfg
          sed -i "s#^test.blobstore.exe.*#test.blobstore.exe=$BLOBEXE#" test.cfg
          sed -i "s#^test.handleservice.dir.*#test.handleservice.dir=$HSDIR#" test.cfg
          sed -i "s#^test.sampleservice.dir.*#test.sampleservice.dir=$SAMPLE_DIR#" test.cfg
          sed -i "s#^test.arango.exe.*#test.arango.exe=$ARANGO_EXE#" test.cfg
          sed -i "s#^test.arango.js.*#test.arango.js=$ARANGO_JS#" test.cfg
          cat test.cfg

      - name: Run tests
        shell: bash
        run: |
          ./gradlew ${{matrix.gradle_test}}

      - name: Upload coverage to Codecov
        uses: codecov/codecov-action@v3
        with:
          token: ${{ secrets.CODECOV_TOKEN }}
          fail_ci_if_error: true