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Commit b3af279

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Jason Kai
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add snakemake cores flag for labelmerge
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dbsc/workflow/rules/zona_bb_subcortex.smk

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@@ -172,7 +172,7 @@ rule labelmerge:
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subject=config["input_lists"]["dwi"]["subject"],
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),
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shell:
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"singularity run {params.labelmerge_container} {params.zona_dir} {params.labelmerge_dir} --base_desc {params.zona_desc} --overlay_bids_dir {params.fs_dir} --overlay_desc {params.fs_desc}"
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"singularity run {params.labelmerge_container} {params.zona_dir} {params.labelmerge_dir} --base_desc {params.zona_desc} --overlay_bids_dir {params.fs_dir} --overlay_desc {params.fs_desc} -c1"
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rule binarize:

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