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Study design (combinations we want to test) #1

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colinbrislawn opened this issue Apr 17, 2021 · 0 comments
Open
8 tasks

Study design (combinations we want to test) #1

colinbrislawn opened this issue Apr 17, 2021 · 0 comments

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@colinbrislawn
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colinbrislawn commented Apr 17, 2021 •
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Programs to test:

  • vsearch (version?) Get feedback from devs
    • default
    • recommended setting
  • SortMeRNA v4.3.2
  • MapSeq ? Get feedback from devs

Databases

  • GG: 13_8 version
  • SILVA: v138.1 Ref NR 99

Pre-clustered Database: Provided by other members of the team
Query percent identity: 95, 97, 99
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