-
Notifications
You must be signed in to change notification settings - Fork 58
/
util.h
237 lines (207 loc) · 6.64 KB
/
util.h
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
#pragma once
#include <algorithm>
#include <cassert>
#include <chrono>
#include <fstream>
#include <functional>
#include <iostream>
#include <thread>
#include <unordered_map>
#include <vector>
#define ROW_WIDTH 1
//#define PRINT_ERRORS
enum DataType { UINT32 = 0, UINT64 = 1 };
template <class KeyType>
struct KeyValue {
KeyType key;
uint64_t value;
} __attribute__((packed));
template <class KeyType>
struct Row {
KeyType key;
uint64_t data[ROW_WIDTH];
};
template <class KeyType = uint64_t>
struct EqualityLookup {
KeyType key;
uint64_t result;
};
struct SearchBound {
size_t start;
size_t stop;
};
namespace util {
const static uint64_t NOT_FOUND = std::numeric_limits<uint64_t>::max();
static void fail(const std::string& message) {
std::cerr << message << std::endl;
exit(EXIT_FAILURE);
}
[[maybe_unused]] static std::string get_suffix(const std::string& filename) {
const std::size_t pos = filename.find_last_of("_");
if (pos == filename.size() - 1 || pos == std::string::npos) return "";
return filename.substr(pos + 1);
}
[[maybe_unused]] static DataType resolve_type(const std::string& filename) {
const std::string suffix = util::get_suffix(filename);
if (suffix == "uint32") {
return DataType::UINT32;
} else if (suffix == "uint64") {
return DataType::UINT64;
} else {
std::cerr << "type " << suffix << " not supported" << std::endl;
exit(EXIT_FAILURE);
}
}
// Pins the current thread to core `core_id`.
static void set_cpu_affinity(const uint32_t core_id) __attribute__((unused));
static void set_cpu_affinity(const uint32_t core_id) {
#ifdef __linux__
cpu_set_t mask;
CPU_ZERO(&mask);
CPU_SET(core_id % std::thread::hardware_concurrency(), &mask);
const int result =
pthread_setaffinity_np(pthread_self(), sizeof(mask), &mask);
if (result != 0) fail("failed to set CPU affinity");
#else
(void)core_id;
std::cout << "we only support thread pinning under Linux" << std::endl;
#endif
}
static uint64_t timing(std::function<void()> fn) {
const auto start = std::chrono::high_resolution_clock::now();
fn();
const auto end = std::chrono::high_resolution_clock::now();
return std::chrono::duration_cast<std::chrono::nanoseconds>(end - start)
.count();
}
// Checks whether data is duplicate free.
// Note that data has to be sorted.
template <typename T>
static bool is_unique(const std::vector<T>& data) {
for (size_t i = 1; i < data.size(); ++i) {
if (data[i] == data[i - 1]) return false;
}
return true;
}
template <class KeyType>
static bool is_unique(const std::vector<KeyValue<KeyType>>& data) {
for (size_t i = 1; i < data.size(); ++i) {
if (data[i].key == data[i - 1].key) return false;
}
return true;
}
// Loads values from binary file into vector.
template <typename T>
static std::vector<T> load_data(const std::string& filename,
bool print = true) {
std::vector<T> data;
const uint64_t ns = util::timing([&] {
std::ifstream in(filename, std::ios::binary);
if (!in.is_open()) {
std::cerr << "unable to open " << filename << std::endl;
exit(EXIT_FAILURE);
}
// Read size.
uint64_t size;
in.read(reinterpret_cast<char*>(&size), sizeof(uint64_t));
data.resize(size);
// Read values.
in.read(reinterpret_cast<char*>(data.data()), size * sizeof(T));
in.close();
});
const uint64_t ms = ns / 1e6;
if (print) {
std::cout << "read " << data.size() << " values from " << filename << " in "
<< ms << " ms (" << static_cast<double>(data.size()) / 1000 / ms
<< " M values/s)" << std::endl;
}
return data;
}
// Writes values from vector into binary file.
template <typename T>
static void write_data(const std::vector<T>& data, const std::string& filename,
const bool print = true) {
const uint64_t ns = util::timing([&] {
std::ofstream out(filename, std::ios_base::trunc | std::ios::binary);
if (!out.is_open()) {
std::cerr << "unable to open " << filename << std::endl;
exit(EXIT_FAILURE);
}
// Write size.
const uint64_t size = data.size();
out.write(reinterpret_cast<const char*>(&size), sizeof(uint64_t));
// Write values.
out.write(reinterpret_cast<const char*>(data.data()), size * sizeof(T));
out.close();
});
const uint64_t ms = ns / 1e6;
if (print) {
std::cout << "wrote " << data.size() << " values to " << filename << " in "
<< ms << " ms (" << static_cast<double>(data.size()) / 1000 / ms
<< " M values/s)" << std::endl;
}
}
// Returns a duplicate-free copy.
// Note that data has to be sorted.
template <typename T>
static std::vector<T> remove_duplicates(const std::vector<T>& data) {
std::vector<T> result = data;
auto last = std::unique(result.begin(), result.end());
result.erase(last, result.end());
return result;
}
// Returns a value for a key at position i.
template <class KeyType>
static uint64_t get_value(const KeyType i) {
return i;
}
// Generates deterministic values for keys.
template <class KeyType>
static std::vector<Row<KeyType>> add_values(const std::vector<KeyType>& keys) {
std::vector<Row<KeyType>> result;
result.reserve(keys.size());
for (uint64_t i = 0; i < keys.size(); ++i) {
Row<KeyType> row;
row.key = keys[i];
for (int j = 0; j < ROW_WIDTH; j++) {
row.data[j] = get_value(i * (j + 1));
}
result.push_back(row);
}
return result;
}
// Based on: https://en.wikipedia.org/wiki/Xorshift
class FastRandom {
public:
explicit FastRandom(
uint64_t seed = 2305843008139952128ull) // The 8th perfect number found
// 1772 by Euler with <3
: seed(seed) {}
uint32_t RandUint32() {
seed ^= (seed << 13);
seed ^= (seed >> 15);
return (uint32_t)(seed ^= (seed << 5));
}
int32_t RandInt32() { return (int32_t)RandUint32(); }
uint32_t RandUint32(uint32_t inclusive_min, uint32_t inclusive_max) {
return inclusive_min + RandUint32() % (inclusive_max - inclusive_min + 1);
}
int32_t RandInt32(int32_t inclusive_min, int32_t inclusive_max) {
return inclusive_min + RandUint32() % (inclusive_max - inclusive_min + 1);
}
float RandFloat(float inclusive_min, float inclusive_max) {
return inclusive_min + ScaleFactor() * (inclusive_max - inclusive_min);
}
// returns float between 0 and 1
float ScaleFactor() {
return static_cast<float>(RandUint32()) /
std::numeric_limits<uint32_t>::max();
}
bool RandBool() { return RandUint32() % 2 == 0; }
uint64_t seed;
static constexpr uint64_t Min() { return 0; }
static constexpr uint64_t Max() {
return std::numeric_limits<uint64_t>::max();
}
};
} // namespace util