Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Saving integration model gets error #58

Open
beyondpie opened this issue Oct 5, 2024 · 0 comments
Open

Saving integration model gets error #58

beyondpie opened this issue Oct 5, 2024 · 0 comments

Comments

@beyondpie
Copy link

Hi Hanqing,

Thanks for the great package! When I use the integration module, I find it will report error when I plan to save it using SeuratIntegration.save with parameter save_adata=True.

TypeError: Cannot setitem on a Categorical with a new category (nan), set the categories first.

Do you know how to fix it? BTW, I am now working on adopting the SeuratIntegration to SnapATAC2. I find the module is written pretty clearly!

Thanks!
Songpeng

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant