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installation issue #201

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newatil opened this issue Jun 10, 2022 · 1 comment
Open

installation issue #201

newatil opened this issue Jun 10, 2022 · 1 comment

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@newatil
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newatil commented Jun 10, 2022

Hello,
I have a problem when installing a tool, when I run the code ./gradlew msa2vcf I get this error?
Downloading https://services.gradle.org/distributions/gradle-6.7-bin.zip

Exception in thread "main" java.net.ConnectException: Connection timed out
at java.net.PlainSocketImpl.socketConnect(Native Method)
at java.net.AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:345)
at java.net.AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:206)
at java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:188)
at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392)
at java.net.Socket.connect(Socket.java:589)
at sun.security.ssl.SSLSocketImpl.connect(SSLSocketImpl.java:656)
at sun.security.ssl.BaseSSLSocketImpl.connect(BaseSSLSocketImpl.java:173)
at sun.net.NetworkClient.doConnect(NetworkClient.java:180)
at sun.net.www.http.HttpClient.openServer(HttpClient.java:432)
at sun.net.www.http.HttpClient.openServer(HttpClient.java:527)
at sun.net.www.protocol.https.HttpsClient.(HttpsClient.java:275)
at sun.net.www.protocol.https.HttpsClient.New(HttpsClient.java:371)
at sun.net.www.protocol.https.AbstractDelegateHttpsURLConnection.getNewHttpClient(AbstractDelegateHttpsURLConnection.java:191)
at sun.net.www.protocol.http.HttpURLConnection.plainConnect0(HttpURLConnection.java:1104)
at sun.net.www.protocol.http.HttpURLConnection.plainConnect(HttpURLConnection.java:998)
at sun.net.www.protocol.https.AbstractDelegateHttpsURLConnection.connect(AbstractDelegateHttpsURLConnection.java:177)
at sun.net.www.protocol.http.HttpURLConnection.getInputStream0(HttpURLConnection.java:1512)
at sun.net.www.protocol.http.HttpURLConnection.getInputStream(HttpURLConnection.java:1440)
at sun.net.www.protocol.https.HttpsURLConnectionImpl.getInputStream(HttpsURLConnectionImpl.java:254)
at org.gradle.wrapper.Download.downloadInternal(Download.java:78)
at org.gradle.wrapper.Download.download(Download.java:63)
at org.gradle.wrapper.Install$1.call(Install.java:68)
at org.gradle.wrapper.Install$1.call(Install.java:48)
at org.gradle.wrapper.ExclusiveFileAccessManager.access(ExclusiveFileAccessManager.java:69)
at org.gradle.wrapper.Install.createDist(Install.java:48)
at org.gradle.wrapper.WrapperExecutor.execute(WrapperExecutor.java:107)
at org.gradle.wrapper.GradleWrapperMain.main(GradleWrapperMain.java:63)
(base) [newatil@hpclogin01 jvarkit]$

Thanks for help :)

@lindenb
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lindenb commented Jun 10, 2022

@newatil it looks like a probleme with your web proxy. It's unrelated to jvarkit. As your sysadmin/ see https://stackoverflow.com/a/22666646/58082

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