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            <h1 class="title"><a href="posts/molscript.html">MolScript</a></h1>
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                    <time class="timeago" datetime="2013-03-04T00:00:00+01:00">2013-03-04 00:00</time>
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                <p>MolScript is a program for displaying molecular 3D structures, such as proteins, in both schematic and detailed representations. It also produces output files that can be used in Raster3d.</p>
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            <h1 class="title"><a href="posts/molsketch.html">molsKetch</a></h1>
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                    <time class="timeago" datetime="2013-03-04T00:00:00+01:00">2013-03-04 00:00</time>
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                <p>molsKetch is a molecular drawing tool for 2D molecular structures. Its goal is to help you draw molecules quick and easily. As well as allowing the user to export high quality images in a number of vector and bitmap formats, it can read and write multiple chemical file formats (using the Open Babel library). molsKetch features intelligent addition/removal of hydrogen atoms and a built-in library that provides quick access to regularly used molecules and functional groups.</p>
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            <h1 class="title"><a href="posts/molsurfer.html">MolSurfer</a></h1>
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                    <time class="timeago" datetime="2013-03-04T00:00:00+01:00">2013-03-04 00:00</time>
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                <p>MolSurfer is a graphical tool that links a 2D projection of a macromolecular interface to a 3D view of the macromolecular structure. MolSurfer can be used to study protein-protein and protein-DNA/RNA interfaces.</p>
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            <h1 class="title"><a href="posts/mopac-7.html">MOPAC 7</a></h1>
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                    <time class="timeago" datetime="2013-03-04T00:00:00+01:00">2013-03-04 00:00</time>
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                <p>MOPAC is a general-purpose semi-empirical molecular orbital package for the study of chemical structures and reactions. The semi-empirical Hamiltonians MNDO, MINDO/3, AM1, and PM3 are used in the electronic part of the calculation to obtain molecular orbitals, the heat of formation and its derivative with resperivative with respect to molecular geometry.</p>
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            <h1 class="title"><a href="posts/mopac-2007.html">MOPAC 2007</a></h1>
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                    <time class="timeago" datetime="2013-03-04T00:00:00+01:00">2013-03-04 00:00</time>
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                <p>MOPAC2007 is a general-purpose semiempirical quantum mechanics package for the study of chemical properties and reactions in gas, solution, or solid-state. MOPAC2007 can be used to directly predict numerous chemical and physical properties, such as Gibbs free energies, activation energies, reaction paths, dipole moments, non-linear optical properties, and infrared spectra. It is based on the public domain MOPAC 7.</p>
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            <h1 class="title"><a href="posts/moscito.html">MOSCITO</a></h1>
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                <p>MOSCITO is designed for molecular dynamics simulations of condensed phase systems defined by classical molecular mechanics force-fields such as AMBER, OPLS, CHARMM and GROMOS.</p>
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            <h1 class="title"><a href="posts/moviemol.html">moviemol</a></h1>
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                    <time class="timeago" datetime="2013-03-04T00:00:00+01:00">2013-03-04 00:00</time>
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                <p>Moveiemol is a program for visualization and animation of molecular structures. Moviemol typically takes sets of molecular coordinates and displays each of these sets or frames one after the other to create a movie. The molecules/atoms/ions are displayed in ball-and-stick form. At any moment during the animation, the molecules can be rotated or translated, magnified or diminished. The program also produces very nice postscript images of publication quality.</p>
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            <h1 class="title"><a href="posts/mpqc.html">MPQC</a></h1>
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                    <time class="timeago" datetime="2013-03-04T00:00:00+01:00">2013-03-04 00:00</time>
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                <p>MPQC is the Massively Parallel Quantum Chemistry Program. It computes properties of atoms and molecules from first principles using the time independent Schr&amp;ouml;dinger equation. It runs on a wide range of architectures ranging from individual workstations to symmetric multiprocessors to massively parallel computers. Its design is object oriented, using the C++ programming language.</p>
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            <h1 class="title"><a href="posts/msms.html">MSMS</a></h1>
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                    <time class="timeago" datetime="2013-03-04T00:00:00+01:00">2013-03-04 00:00</time>
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                <p>MSMS stands for Michel Sanner's Molecular Surface, or Maximal Speed Molecular Surface. It allows the user to compute very efficiently triangulations of solvent excluded surfaces.</p>
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            <h1 class="title"><a href="posts/multimode.html">MULTIMODE</a></h1>
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                    <time class="timeago" datetime="2013-03-04T00:00:00+01:00">2013-03-04 00:00</time>
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                <p>MULTIMODE performs Vibrational Self Consistent Field (VSCF) and several types of &amp;quot;CI&amp;quot; calculations for the rovibrational energies and wavefunctions of polyatomic molecules, transition states, clusters, etc. The code is based on the Watson Hamiltonian for non-linear molecules.</p>
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