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WIP: Document roxygen tags in referenced topics
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docs/ | ||
/r-packages | ||
/.Rprofile | ||
doc | ||
Meta |
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#' Exports tags | ||
#' | ||
#' ```{r, child = "man/doc/tags-namespace-exports.md"} | ||
#' ``` | ||
#' | ||
#' @name @@export | ||
#' @aliases @@exportClass @@exportMethod @@exportPattern | ||
NULL | ||
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#' Imports tags | ||
#' | ||
#' ```{r, child = "man/doc/tags-namespace-imports.md"} | ||
#' ``` | ||
#' | ||
#' @name @@import | ||
#' @aliases @@importFrom @@importClassesFrom @@importMethodsFrom | ||
#' @@useDynLib | ||
NULL |
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For a function to be usable outside of your package, you must __export__ it. By default roxygen2 doesn't export anything from your package. If you want an object to be publicly available, you must explicitly tag it with `@export`. | ||
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Use the following guidelines to decide what to export: | ||
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* Functions: export functions that you want to make available. Exported | ||
functions must be documented, and you must be cautious when changing their | ||
interface. | ||
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* Datasets: all datasets are publicly available. They exist outside of the | ||
package namespace and should not be exported. | ||
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* S3 classes: if you want others to be able to create instances of the class | ||
`@export` the constructor function. | ||
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* S3 generics: the generic is a function so `@export` if you want it to | ||
be usable outside the package | ||
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* S3 methods: every S3 method _must_ be exported, even if the generic is not. | ||
Otherwise the S3 method table will not be generated correctly and internal | ||
generics will not find the correct method. | ||
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If you are providing a method for a generic defined in another package, | ||
you must also import that generic. | ||
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* S4 classes: if you want others to be able to extend your class, `@export` it. | ||
If you want others to create instances of your class, but not extend it, | ||
`@export` the constructor function, but not the class. | ||
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```R | ||
# Can extend and create | ||
#' @export | ||
setClass("A") | ||
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# Can extend, but constructor not exported | ||
#' @export | ||
B <- setClass("B") | ||
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# Can create, but not extend | ||
#' @export C | ||
C <- setClass("C") | ||
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# Can create and extend | ||
#' @export D | ||
#' @exportClass D | ||
D <- setClass("D") | ||
``` | ||
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* S4 generics: `@export` if you want the generic to be publicly usable. | ||
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* S4 methods: you only need to `@export` methods for generics that you | ||
did not define. | ||
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* RC classes: the same principles apply as for S4 classes. `@export` | ||
will only export the class. | ||
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### Specialised exports | ||
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Generally, roxygen2 can generate the correct namespace directive when `@export`ing a specific object. However, you may want to override the defaults and exercise greater control. In this case you can use the more specialised tags described below: | ||
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* `@export foo` generates `export(foo)` | ||
* `@exportClass foo` generates `exportClasses(foo)` | ||
* `@exportMethod foo` generates `exportMethods(foo)` | ||
* `@exportPattern foo` generates `exportPattern(foo)` | ||
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For even more specialised cases you can use `@rawNamespace code` which inserts `code` literally into the `NAMESPACE`. If you need to automate this, `@evalNamespace foo()` will evaluate the `foo()` in the package environment and insert the results into `NAMESPACE`. Because `evalNamespace()` is run in the package environment, it can only generate exports, not imports. |
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The `NAMESPACE` also controls which functions from other packages are made available to your package. Only unique directives are saved to the `NAMESPACE` file, so you can repeat them as needed to maintain a close link between the functions where they are needed and the namespace file. | ||
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If you are using just a few functions from another package, the recommended option is to note the package name in the `Imports:` field of the `DESCRIPTION` file and call the function(s) explicitly using `::`, e.g., `pkg::fun()`. Alternatively, though no longer recommended due to its poorer readability, use `@importFrom`, e.g., `@importFrom pgk fun`, and call the function(s) without `::`. | ||
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If you are using many functions from another package, use `@import package` to import them all and make available without using `::`. | ||
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If you want to add a new method to an S3 generic, import it with `@importFrom pkg generic`. | ||
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If you are using S4 you may also need: | ||
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* `@importClassesFrom package classa classb ...` to import selected S4 classes. | ||
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* `@importMethodsFrom package methoda methodb ...` to import selected S4 | ||
methods. | ||
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To import compiled code from another package, use `@useDynLib` | ||
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* `@useDynLib package` imports all compiled functions. | ||
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* `@useDynLib package routinea routineb` imports selected compiled functions. | ||
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* Any `@useDynLib` specification containing a comma, e.g. | ||
`@useDynLib mypackage, .registration = TRUE` will be inserted as is | ||
into the the NAMESPACE, e.g. `useDynLib(mypackage, .registration = TRUE)` |
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