docker-compose.dev.vector.yml

---
version: '3'

services:
  database:
    image: postgres:12.2
    volumes:
      - ../data/postgre/data:/var/lib/postgresql
    environment:
      POSTGRES_PASSWORD: fragalysis
      POSTGRES_USER: fragalysis
      POSTGRES_DB: frag
      PGDATA: /var/lib/postgresql/data/pgdata
    ports:
      - '5432:5432'
    healthcheck:
      test: pg_isready -U fragalysis -d frag
      interval: 10s
      timeout: 2s
      retries: 5
      start_period: 10s
  redis:
    image: redis:7.0.12-alpine3.18
    container_name: redis
    ports:
    - "6379:6379"
    healthcheck:
      test: redis-cli ping
      interval: 10s
      timeout: 2s
      retries: 5
      start_period: 10s
  graph:
    container_name: neo4j
    image: informaticsmatters/fragnet-test:3.5.25-xchem-combi-sample-2021-02
    ports:
      # Comment these two out in produciton
      - '7474:7474'
      - '7687:7687'
    ulimits:
      nofile:
        soft: 40000
        hard: 40000
    environment:
      GRAPH_PASSWORD: test123
      CYPHER_PRE_NEO4J_SLEEP: 0
      NEO4J_dbms_memory_pagecache_size: 4G
    healthcheck:
      test: wget http://localhost:7474 || exit 1
      interval: 10s
      timeout: 10s
      retries: 20
      start_period: 10s
  web:
    container_name: web_dock
    image: xchem/fragalysis-stack:latest
    # image: alanbchristie/fragalysis-backend:1187.3
    # image: boriskovarm2ms/fragalysis-stack:experiment2
    # image: kaliif/fragalysis-backend:latest
    command: /bin/bash /code/launch-stack.sh
    volumes:
      - ../data/logs:/code/logs/
      - ../data/media:/code/media/
      - ../fragalysis-frontend:/code/frontend
    ports:
      - '8080:80'
    environment:
      POSTGRESQL_DATABASE: frag
      POSTGRESQL_USER: fragalysis
      POSTGRESQL_PASSWORD: fragalysis
      POSTGRESQL_HOST: database
      POSTGRESQL_PORT: 5432
      NEO4J_AUTH: neo4j/test123
      # DISCOURSE_API_KEY: ${DISCOURSE_API_KEY}
      FRAGALYSIS_BACKEND_SENTRY_DNS: https://27fa0675f555431aa02ca552e93d8cfb@o194333.ingest.sentry.io/1298290
      ISPYB_FLAG: 'False'
      # DISCOURSE_DEV_POST_SUFFIX: '-boris-local'
      # DISCOURSE_HOST: 'https://discourse.xchem-dev.diamond.ac.uk'
      SQUONK2_UI_URL: 'https://data-manager-ui.xchem-dev.diamond.ac.uk/data-manager-ui'
      SQUONK2_DMAPI_URL: 'https://data-manager.xchem-dev.diamond.ac.uk/data-manager-api'
      SQUONK2_ASAPI_URL: 'https://account-server.xchem-dev.diamond.ac.uk/account-server-api'
      SQUONK2_ORG_OWNER: ${SQUONK2_ORG_OWNER}
      SQUONK2_ORG_OWNER_PASSWORD: ${SQUONK2_ORG_OWNER_PASSWORD}
      SQUONK2_ORG_UUID: ${SQUONK2_ORG_UUID}
      SQUONK2_PRODUCT_FLAVOUR: 'SILVER'
      SQUONK2_SLUG: ${SQUONK2_SLUG}
      SQUONK2_UNIT_BILLING_DAY: 3
      OIDC_AS_CLIENT_ID: 'account-server-api-dev'
      OIDC_DM_CLIENT_ID: 'data-manager-api-dev'
      OIDC_KEYCLOAK_REALM: 'https://keycloak.xchem-dev.diamond.ac.uk/auth/realms/xchem'
      OIDC_RP_CLIENT_SECRET: ${OIDC_RP_CLIENT_SECRET}
      OIDC_RP_CLIENT_ID: 'fragalysis-local'
      OIDC_RENEW_ID_TOKEN_EXPIRY_MINUTES: 210
      ISPYB_HOST: ispybdbproxy.diamond.ac.uk
      ISPYB_PORT: 4306
      ISPYB_USER: ${ISPYB_USER}
      ISPYB_PASSWORD: ${ISPYB_PASSWORD}
      SECURITY_CONNECTOR: ssh_ispyb
      SSH_HOST: ssh.diamond.ac.uk
      SSH_USER: ${SSH_USER}
      SSH_PASSWORD: ${SSH_PASSWORD}
      LOGGING_FRAMEWORK_ROOT_LEVEL: DEBUG
      AUTHENTICATE_UPLOAD: 'False'
      CELERY_TASK_ALWAYS_EAGER: 'True'
      DEBUG_FRAGALYSIS: 'True'
      PROXY_FORWARDED_PROTO_HEADER: 'http'
      LEGACY_URL: 'https://fragalysis.diamond.ac.uk'
      DEPLOYMENT_MODE: 'development'
      # INFECTIONS: 'structure-download'
    depends_on:
      database:
        condition: service_healthy
      redis:
        condition: service_healthy
      graph:
        condition: service_healthy