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use only a single thread for samtools sort #12

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bernt-matthias opened this issue Jul 29, 2020 · 0 comments

bernt-matthias commented Jul 29, 2020

with -@ 16 I get samtools sort: couldn't allocate memory for bam_mem

also better on HPC systems where the resources need to be allocated precisely.

see also bioconda/bioconda-recipes#23441

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bernt-matthias mentioned this issue

let valet use only one thread for samtools sort bioconda/bioconda-recipes#23441

Merged

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