FastP Version 0.24, doi | PubMed | github
MultiQC Version 1.19, doi | PubMed | github
Samtools Version 1.19, doi | PubMed | github
pyMLST Version 2.1.6, doi | PubMed | github
Flye Version 2.9, doi | PubMed | github
DragonFlye Version 1.1.2, github
Shovill Version 1.1.0, github
Busco Version 5.3.0, doi | PubMed | Website
Kraken2 Version 2.1.2, doi | PubMed | github
Mob Suite Version 3.1.8, doi | PubMed | github
Porechop_abi Version 0.5.0, doi | BiorXiv | github
Prokka Version 1.14.6, doi | PubMed | github
Rasusa Version 0.3.0, doi | Article | github
AMRfinder Plus Version 3.11.18, doi | PubMed | github
ConfindR Version 0.7.4, doi | PubMed | github
Abricate Version 1.0.1, github
Hamronization Version 1.1.4, github