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Phosphorylation localisation score, fdr. #126

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ypriverol opened this issue Nov 1, 2018 · 2 comments
Open

Phosphorylation localisation score, fdr. #126

ypriverol opened this issue Nov 1, 2018 · 2 comments
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@ypriverol
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We need to include in PÍA a phosphorylation localización score and FDR .
I see so far two popular scores A-score and PhosphoRS for the localisation score. I will provide some code.
@ypriverol ypriverol self-assigned this Nov 1, 2018
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https://github.com/compomics/peptide-shaker/blob/23349246f7b1afd9bb6a9d026f280d14249e8c4e/src/main/java/eu/isas/peptideshaker/ptm/PtmScorer.java

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We will implement a different tool for protein phosphorylation annotation in mzIndetML and mzTab.

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