Micrometer dependencies throwing an exception when running in a native app using Hikari/Hibernate #4155

ivangfr · 2020-09-23T10:36:14Z

Hi, I am getting an exception when running my native application with metrics.

The application is this one: https://github.com/ivangfr/graalvm-quarkus-micronaut-springboot/tree/master/book-api/micronaut-book-api

If those two lines in build.gradle are commented, everything works fine

...
    // implementation("io.micronaut.micrometer:micronaut-micrometer-core")
    // implementation("io.micronaut.micrometer:micronaut-micrometer-registry-prometheus")
...

However, when I uncomment it, build the native docker image of the app and run it, I am getting the following exception during the startup

[main] ERROR io.micronaut.runtime.Micronaut - Error starting Micronaut server: Bean definition [org.hibernate.SessionFactory] could not be   loaded: Error instantiating bean of type  [org.hibernate.boot.registry.StandardServiceRegistry]

Message: Class must be instance of com.codahale.metrics.MetricRegistry or io.micrometer.core.instrument.MeterRegistry
Path Taken: SessionFactory.hibernateSessionFactory([SessionFactoryBuilder sessionFactoryBuilder]) --> SessionFactoryBuilder.  hibernateSessionFactoryBuilder([MetadataSources metadataSources],ValidatorFactory validatorFactory) --> MetadataSources.  hibernateMetadataSources(JpaConfiguration jpaConfiguration,[StandardServiceRegistry standardServiceRegistry]) --> StandardServiceRegistry.  hibernateStandardServiceRegistry(String dataSourceName,[DataSource dataSource])
io.micronaut.context.exceptions.BeanInstantiationException: Bean definition [org.hibernate.SessionFactory] could not be loaded: Error   instantiating bean of type  [org.hibernate.boot.registry.StandardServiceRegistry]

Message: Class must be instance of com.codahale.metrics.MetricRegistry or io.micrometer.core.instrument.MeterRegistry
Path Taken: SessionFactory.hibernateSessionFactory([SessionFactoryBuilder sessionFactoryBuilder]) --> SessionFactoryBuilder.  hibernateSessionFactoryBuilder([MetadataSources metadataSources],ValidatorFactory validatorFactory) --> MetadataSources.  hibernateMetadataSources(JpaConfiguration jpaConfiguration,[StandardServiceRegistry standardServiceRegistry]) --> StandardServiceRegistry.  hibernateStandardServiceRegistry(String dataSourceName,[DataSource dataSource])
	at io.micronaut.context.DefaultBeanContext.initializeContext(DefaultBeanContext.java:1540)
	at io.micronaut.context.DefaultApplicationContext.initializeContext(DefaultApplicationContext.java:220)
	at io.micronaut.context.DefaultBeanContext.readAllBeanDefinitionClasses(DefaultBeanContext.java:2771)
	at io.micronaut.context.DefaultBeanContext.start(DefaultBeanContext.java:228)
	at io.micronaut.context.DefaultApplicationContext.start(DefaultApplicationContext.java:166)
	at io.micronaut.runtime.Micronaut.start(Micronaut.java:64)
	at io.micronaut.runtime.Micronaut.run(Micronaut.java:294)
	at io.micronaut.runtime.Micronaut.run(Micronaut.java:280)
	at com.mycompany.micronautbookapi.Application.main(Application.java:18)
Caused by: io.micronaut.context.exceptions.BeanInstantiationException: Error instantiating bean of type  [org.hibernate.boot.registry.  StandardServiceRegistry]

Message: Class must be instance of com.codahale.metrics.MetricRegistry or io.micrometer.core.instrument.MeterRegistry
Path Taken: SessionFactory.hibernateSessionFactory([SessionFactoryBuilder sessionFactoryBuilder]) --> SessionFactoryBuilder.  hibernateSessionFactoryBuilder([MetadataSources metadataSources],ValidatorFactory validatorFactory) --> MetadataSources.  hibernateMetadataSources(JpaConfiguration jpaConfiguration,[StandardServiceRegistry standardServiceRegistry]) --> StandardServiceRegistry.  hibernateStandardServiceRegistry(String dataSourceName,[DataSource dataSource])
	at io.micronaut.context.DefaultBeanContext.doCreateBean(DefaultBeanContext.java:1916)
	at io.micronaut.context.DefaultBeanContext.createAndRegisterSingletonInternal(DefaultBeanContext.java:2638)
	at io.micronaut.context.DefaultBeanContext.createAndRegisterSingleton(DefaultBeanContext.java:2624)
	at io.micronaut.context.DefaultBeanContext.getBeanForDefinition(DefaultBeanContext.java:2296)
	at io.micronaut.context.DefaultBeanContext.getBeanInternal(DefaultBeanContext.java:2270)
	at io.micronaut.context.DefaultBeanContext.getBean(DefaultBeanContext.java:1240)
	at io.micronaut.context.AbstractBeanDefinition.getBeanForConstructorArgument(AbstractBeanDefinition.java:1013)
	at io.micronaut.data.hibernate.runtime.$DataEntityManagerFactoryBean$HibernateStandardServiceRegistry0Definition.doBuild(Unknown Source)
	at io.micronaut.context.AbstractParametrizedBeanDefinition.build(AbstractParametrizedBeanDefinition.java:118)
	at io.micronaut.context.BeanDefinitionDelegate.build(BeanDefinitionDelegate.java:139)
	at io.micronaut.context.DefaultBeanContext.doCreateBean(DefaultBeanContext.java:1889)
	at io.micronaut.context.DefaultBeanContext.createAndRegisterSingletonInternal(DefaultBeanContext.java:2638)
	at io.micronaut.context.DefaultBeanContext.createAndRegisterSingleton(DefaultBeanContext.java:2624)
	at io.micronaut.context.DefaultBeanContext.getBeanForDefinition(DefaultBeanContext.java:2296)
	at io.micronaut.context.DefaultBeanContext.getBeanInternal(DefaultBeanContext.java:2270)
	at io.micronaut.context.DefaultBeanContext.getBean(DefaultBeanContext.java:1240)
	at io.micronaut.context.AbstractBeanDefinition.getBeanForConstructorArgument(AbstractBeanDefinition.java:1013)
	at io.micronaut.configuration.hibernate.jpa.$EntityManagerFactoryBean$HibernateMetadataSources1Definition.doBuild(Unknown Source)
	at io.micronaut.context.AbstractParametrizedBeanDefinition.build(AbstractParametrizedBeanDefinition.java:118)
	at io.micronaut.context.BeanDefinitionDelegate.build(BeanDefinitionDelegate.java:139)
	at io.micronaut.context.DefaultBeanContext.doCreateBean(DefaultBeanContext.java:1889)
	at io.micronaut.context.DefaultBeanContext.createAndRegisterSingletonInternal(DefaultBeanContext.java:2638)
	at io.micronaut.context.DefaultBeanContext.createAndRegisterSingleton(DefaultBeanContext.java:2624)
	at io.micronaut.context.DefaultBeanContext.getBeanForDefinition(DefaultBeanContext.java:2296)
	at io.micronaut.context.DefaultBeanContext.getBeanInternal(DefaultBeanContext.java:2270)
	at io.micronaut.context.DefaultBeanContext.getBean(DefaultBeanContext.java:1240)
	at io.micronaut.context.AbstractBeanDefinition.getBeanForConstructorArgument(AbstractBeanDefinition.java:1013)
	at io.micronaut.configuration.hibernate.jpa.$EntityManagerFactoryBean$HibernateSessionFactoryBuilder2Definition.build(Unknown Source)
	at io.micronaut.context.BeanDefinitionDelegate.build(BeanDefinitionDelegate.java:143)
	at io.micronaut.context.DefaultBeanContext.doCreateBean(DefaultBeanContext.java:1889)
	at io.micronaut.context.DefaultBeanContext.createAndRegisterSingletonInternal(DefaultBeanContext.java:2638)
	at io.micronaut.context.DefaultBeanContext.createAndRegisterSingleton(DefaultBeanContext.java:2624)
	at io.micronaut.context.DefaultBeanContext.getBeanForDefinition(DefaultBeanContext.java:2296)
	at io.micronaut.context.DefaultBeanContext.getBeanInternal(DefaultBeanContext.java:2270)
	at io.micronaut.context.DefaultBeanContext.getBean(DefaultBeanContext.java:1240)
	at io.micronaut.context.AbstractBeanDefinition.getBeanForConstructorArgument(AbstractBeanDefinition.java:1013)
	at io.micronaut.configuration.hibernate.jpa.$EntityManagerFactoryBean$HibernateSessionFactory3Definition.build(Unknown Source)
	at io.micronaut.context.BeanDefinitionDelegate.build(BeanDefinitionDelegate.java:143)
	at io.micronaut.context.DefaultBeanContext.doCreateBean(DefaultBeanContext.java:1889)
	at io.micronaut.context.DefaultBeanContext.createAndRegisterSingletonInternal(DefaultBeanContext.java:2638)
	at io.micronaut.context.DefaultBeanContext.createAndRegisterSingleton(DefaultBeanContext.java:2624)
	at io.micronaut.context.DefaultBeanContext.loadContextScopeBean(DefaultBeanContext.java:2163)
	at io.micronaut.context.DefaultBeanContext.initializeContext(DefaultBeanContext.java:1538)
	... 8 common frames omitted
Caused by: java.lang.IllegalArgumentException: Class must be instance of com.codahale.metrics.MetricRegistry or io.micrometer.core.instrument.  MeterRegistry
	at com.zaxxer.hikari.HikariConfig.setMetricRegistry(HikariConfig.java:667)
	at com.zaxxer.hikari.HikariDataSource.setMetricRegistry(HikariDataSource.java:237)
	at io.micronaut.configuration.jdbc.hikari.DatasourceFactory.addMeterRegistry(DatasourceFactory.java:79)
	at io.micronaut.configuration.jdbc.hikari.DatasourceFactory.dataSource(DatasourceFactory.java:67)
	at io.micronaut.configuration.jdbc.hikari.$DatasourceFactory$DataSource0Definition.build(Unknown Source)
	at io.micronaut.context.BeanDefinitionDelegate.build(BeanDefinitionDelegate.java:143)
	at io.micronaut.context.DefaultBeanContext.doCreateBean(DefaultBeanContext.java:1889)
	... 50 common frames omitted

Task List

Steps to reproduce provided
Stacktrace (if present) provided
Example that reproduces the problem uploaded to Github
Full description of the issue provided (see below)

Steps to Reproduce

Clone project mentioned above
Uncomment the 2 lines mentioned above
Run the app by following the README

Expected Behaviour

No exception should be thrown

Actual Behaviour

It's throwing an exception as described above

Environment Information

Operating System: Mac
Micronaut Version: 2.0.3
JDK Version: 11

Example Application

https://github.com/ivangfr/graalvm-quarkus-micronaut-springboot/tree/master/book-api/micronaut-book-api

The text was updated successfully, but these errors were encountered:

agilob · 2020-10-03T18:58:43Z

I was working on adding native-image support to jhipster-micronaut and had the same issue. Compilation fails when micrometer is enabled, but another problem you might face later is, some hikari jdbc drivers dont compile correctly with native-image.

Eg. hikari with postgres compiles, but doesn't run when invoked

Caused by: io.micronaut.context.exceptions.BeanInstantiationException: Error instantiating bean of type [javax.sql.DataSource]: Failed to initialize pool: The connection attempt failed.
        at io.micronaut.context.DefaultBeanContext.doCreateBean(DefaultBeanContext.java:1918)
        at io.micronaut.context.DefaultBeanContext.createAndRegisterSingletonInternal(DefaultBeanContext.java:2635)
        at io.micronaut.context.DefaultBeanContext.createAndRegisterSingleton(DefaultBeanContext.java:2621)
        at io.micronaut.context.DefaultBeanContext.loadContextScopeBean(DefaultBeanContext.java:2163)
        at io.micronaut.context.DefaultBeanContext.initializeContext(DefaultBeanContext.java:1538)
        ... 6 common frames omitted
Caused by: com.zaxxer.hikari.pool.HikariPool$PoolInitializationException: Failed to initialize pool: The connection attempt failed.
        at com.zaxxer.hikari.pool.HikariPool.throwPoolInitializationException(HikariPool.java:595)
        at com.zaxxer.hikari.pool.HikariPool.checkFailFast(HikariPool.java:581)
        at com.zaxxer.hikari.pool.HikariPool.<init>(HikariPool.java:115)
        at com.zaxxer.hikari.HikariDataSource.<init>(HikariDataSource.java:81)
        at io.micronaut.configuration.jdbc.hikari.HikariUrlDataSource.<init>(HikariUrlDataSource.java:35)
        at io.micronaut.configuration.jdbc.hikari.DatasourceFactory.dataSource(DatasourceFactory.java:66)
        at io.micronaut.configuration.jdbc.hikari.$DatasourceFactory$DataSource0Definition.build(Unknown Source)
        at io.micronaut.context.BeanDefinitionDelegate.build(BeanDefinitionDelegate.java:143)
        at io.micronaut.context.DefaultBeanContext.doCreateBean(DefaultBeanContext.java:1889)
        ... 10 common frames omitted
Caused by: org.postgresql.util.PSQLException: The connection attempt failed.
        at org.postgresql.core.v3.ConnectionFactoryImpl.openConnectionImpl(ConnectionFactoryImpl.java:297)
        at org.postgresql.core.ConnectionFactory.openConnection(ConnectionFactory.java:49)
        at org.postgresql.jdbc.PgConnection.<init>(PgConnection.java:217)
        at org.postgresql.Driver.makeConnection(Driver.java:458)
        at org.postgresql.Driver.connect(Driver.java:260)
        at com.zaxxer.hikari.util.DriverDataSource.getConnection(DriverDataSource.java:138)
        at com.zaxxer.hikari.pool.PoolBase.newConnection(PoolBase.java:358)
        at com.zaxxer.hikari.pool.PoolBase.newPoolEntry(PoolBase.java:206)
        at com.zaxxer.hikari.pool.HikariPool.createPoolEntry(HikariPool.java:477)
        at com.zaxxer.hikari.pool.HikariPool.checkFailFast(HikariPool.java:560)
        ... 17 common frames omitted
Caused by: java.net.SocketException: Connection reset
        at java.net.SocketInputStream.read(SocketInputStream.java:186)
        at java.net.SocketInputStream.read(SocketInputStream.java:140)
        at org.postgresql.core.VisibleBufferedInputStream.readMore(VisibleBufferedInputStream.java:161)
        at org.postgresql.core.VisibleBufferedInputStream.ensureBytes(VisibleBufferedInputStream.java:128)
        at org.postgresql.core.VisibleBufferedInputStream.ensureBytes(VisibleBufferedInputStream.java:113)
        at org.postgresql.core.VisibleBufferedInputStream.read(VisibleBufferedInputStream.java:73)
        at org.postgresql.core.PGStream.receiveChar(PGStream.java:370)
        at org.postgresql.core.v3.ConnectionFactoryImpl.enableSSL(ConnectionFactoryImpl.java:416)
        at org.postgresql.core.v3.ConnectionFactoryImpl.tryConnect(ConnectionFactoryImpl.java:140)
        at org.postgresql.core.v3.ConnectionFactoryImpl.openConnectionImpl(ConnectionFactoryImpl.java:197)
        ... 26 common frames omitted

Can you confirm you had this or similar issue with hikari and micronaut?

ivangfr · 2020-10-03T19:31:55Z

Hi @agilob In my app, I am using MySQL and JPA/Hibernate/Hikari and I don't have any problem running it in JVM or Native mode. So, except for the metrics problem that I described in this issue, I don't have any database problem.

graemerocher · 2020-10-07T10:36:55Z

PR submitted to the module micronaut-projects/micronaut-micrometer#158

ivangfr · 2020-10-14T12:41:14Z

Hi @graemerocher @ilopmar !

With the new version 2.1.1, I checked again the issue described above, and it seems that it's still present.

I am using the same app, micronaut-book-api (https://github.com/ivangfr/graalvm-quarkus-micronaut-springboot/tree/master/book-api/micronaut-book-api).

The changes I did, in build.gradle

1st change
from

ext {
    set('micronautVersion', '2.0.3')
...
}

to

ext {
    set('micronautVersion', '2.1.1')
...
}

2nd change
from

...
    // implementation("io.micronaut.micrometer:micronaut-micrometer-core")
    // implementation("io.micronaut.micrometer:micronaut-micrometer-registry-prometheus")
...

to

...
    implementation("io.micronaut.micrometer:micronaut-micrometer-core")
    implementation("io.micronaut.micrometer:micronaut-micrometer-registry-prometheus")
...

Am I missing something? Thanks!

ivangfr · 2020-11-21T17:48:11Z

Hi, it's just to let you know that the problem described above seems to be fixed when I updated my application to Micronaut version 2.2.0.

graemerocher added the relates-to: graal label Sep 23, 2020

graemerocher added this to the 2.1.1 milestone Oct 3, 2020

graemerocher mentioned this issue Oct 7, 2020

Add typehint for MeterRegistry micronaut-projects/micronaut-micrometer#158

Merged

graemerocher added the status: pr submitted A pull request has been submitted for the issue label Oct 7, 2020

ilopmar closed this as completed in micronaut-projects/micronaut-micrometer#158 Oct 7, 2020

agilob mentioned this issue Oct 14, 2020

Release 1.0.0 Checklist jhipster/generator-jhipster-micronaut#189

Closed

13 tasks

JasonTypesCodes mentioned this issue Nov 24, 2020

[Draft] Native image jhipster/generator-jhipster-micronaut#174

Closed

6 tasks

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Micrometer dependencies throwing an exception when running in a native app using Hikari/Hibernate #4155

Micrometer dependencies throwing an exception when running in a native app using Hikari/Hibernate #4155

ivangfr commented Sep 23, 2020 •

edited

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agilob commented Oct 3, 2020

ivangfr commented Oct 3, 2020

graemerocher commented Oct 7, 2020

ivangfr commented Oct 14, 2020 •

edited

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ivangfr commented Nov 21, 2020

Micrometer dependencies throwing an exception when running in a native app using Hikari/Hibernate #4155

Micrometer dependencies throwing an exception when running in a native app using Hikari/Hibernate #4155

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ivangfr commented Sep 23, 2020 • edited Loading

Task List

Steps to Reproduce

Expected Behaviour

Actual Behaviour

Environment Information

Example Application

agilob commented Oct 3, 2020

ivangfr commented Oct 3, 2020

graemerocher commented Oct 7, 2020

ivangfr commented Oct 14, 2020 • edited Loading

ivangfr commented Nov 21, 2020

ivangfr commented Sep 23, 2020 •

edited

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ivangfr commented Oct 14, 2020 •

edited

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