Add multiple serological codes from rel_dna_ser.txt table's column "Expert Assigned Exceptions".

[abragtim]

Add to PARSE_HLA_CODE_EXCEPTIONS_MULTIPLE_SEROLOGICAL_CODES also HLA codes ​​that also have a split_number in "Expert Assigned Exceptions".

viz. discussion in #1048

[abragtim]

@kubantjan, je to překlep nebo jsme to tak schválně z nějakého důvodu upravili?

txmatching/txmatching/utils/hla_system/rel_dna_ser.txt

Line 22584 in 023c59b

DQB1*;03:361;;;3;DQB1

[abragtim]

@kubantjan,
Tak bude vypadat PARSE_HLA_CODE_EXCEPTIONS_MULTIPLE_SEROLOGICAL_CODES po předání expert assigned exceptions. Je to docela velká změna v datech pro multiple values. Máme jistotu v těch expert exceptions od https://hla.alleles.org/wmda/index.html ? To je pro případ, když budeme zadávat expert exceptions nejen pro split assumed. Nebo bude lepší dostávat multiples jenom pro split_assumed a pro ostatní sources tohle nedělat?

C04:03: {'CW6', 'CW4'}
A02:55: {'A2', 'A28'}
A31:08: {'A31', 'A24'}
A32:04: {'A32', 'A3'}
A66:02: {'A34', 'A66'}
A66:05: {'A26', 'A66'}
B15:08: {'B62', 'B75'}
B15:11: {'B62', 'B75'}
B15:12: {'B62', 'B76'}
B15:14: {'B62', 'B76'}
B15:15: {'B62', 'B75'}
B15:19: {'B62', 'B76'}
B15:24: {'B62', 'B77'}
B15:29: {'B70', 'B15'}
B15:31: {'B62', 'B75'}
B15:46: {'B62', 'B72'}
B15:52: {'B70', 'B15'}
B15:80: {'B70', 'B15'}
B15:93: {'B71', 'B15'}
B15:108: {'B71', 'B15'}
B15:114: {'B70', 'B15'}
B27:08: {'B7', 'B2708'}
B35:21: {'B78', 'B35'}
B37:02: {'B37', 'B27'}
B40:05: {'B4005', 'B40'}
B40:12: {'B48', 'B40'}
B40:21: {'B40', 'B15'}
B40:26: {'B21', 'B40'}
B40:28: {'B40', 'B4005'}
B40:39: {'B40', 'B41'}
B44:09: {'B45', 'B44'}
B44:16: {'B47', 'B44'}
B44:42: {'B21', 'B44'}
B45:04: {'B21', 'B45'}
B46:11: {'B46', 'B22'}
B48:02: {'B48', 'B70'}
B50:02: {'B45', 'B50'}
B53:06: {'B51', 'B53'}
B55:08: {'B56', 'B55'}
B56:03: {'B15', 'B22'}
B56:06: {'B78', 'B22'}
B56:10: {'B56', 'B55'}
B56:12: {'B56', 'B55'}
B58:08: {'B17', 'B5'}
B78:04: {'B78', 'B35'}
C04:06: {'CW6', 'CW4'}
C12:14: {'CW12', 'CW7'}
C14:02: {'CW1', 'CW14'}
C14:03: {'CW1', 'CW14'}
C14:05: {'CW1', 'CW14'}
C14:08: {'CW1', 'CW14'}
C15:07: {'CW15', 'CW3'}
C15:21: {'CW15', 'CW3'}
C17:01: {'CW17', 'CW7'}
C17:03: {'CW17', 'CW7'}
C18:01: {'CW6', 'CW18'}
C18:02: {'CW6', 'CW18'}
DRB104:22: {'DR3', 'DR4'}
DRB108:31: {'DR11', 'DR8'}
DRB113:21: {'DR11', 'DR13'}
DRB113:24: {'DR11', 'DR13'}
DRB113:46: {'DR11', 'DR13'}
DRB113:50: {'DR11', 'DR13'}
DRB113:54: {'DR13', 'DR14'}
DRB113:62: {'DR11', 'DR13'}
DRB114:15: {'DR8', 'DR14'}
DRB114:53: {'DR13', 'DR14'}
DRB114:57: {'DR14', 'DR4'}

Jenom pro split assumed to vypadá takhle:
C04:03: ['CW4', 'CW6']
A02:55: {'A2', 'A28'}
A31:08: {'A31', 'A24'}
A32:04: {'A32', 'A3'}
A66:05: {'A26', 'A66'}
B35:21: {'B78', 'B35'}
B37:02: {'B37', 'B27'}
B40:21: {'B40', 'B15'}
B40:28: {'B40', 'B4005'}
B45:04: {'B21', 'B45'}
B46:11: {'B46', 'B22'}
B53:06: {'B51', 'B53'}
B78:04: {'B78', 'B35'}
DRB113:24: {'DR13', 'DR11'}
DRB113:46: {'DR13', 'DR11'}
DRB113:62: {'DR13', 'DR11'}
DRB1*14:57: {'DR4', 'DR14'}

[kubantjan]

@abragtim to 1. je preklep

[kubantjan]

Tohle je na diskusi s IKEMem to druhe. Pro ted prosim to issue teda pauzneme, ja se ikemu s tim ozvu. Jen prosim v mini PR fixni ten preklep

[kubantjan]

PRosim v ramci tohoto PR udelat

1. smazat ten preklep
2. pridat test co explicitne testuje tech par kodu co tam mas nahore, jak se ted zparsujou. (tzn mely by se sparsovat tak, ze vratime multiple codes found parsing issue

[abragtim]

Blocked by #1036

[kubantjan]

Povazuju spis ted za napad, ktery nekdy muzeme probrat s ikemem, ale spis je to neco co nebudeme delat