lv2_gpu_functions.h

/*
 *  MEGAHIT
 *  Copyright (C) 2014 The University of Hong Kong
 *
 *  This program is free software: you can redistribute it and/or modify
 *  it under the terms of the GNU General Public License as published by
 *  the Free Software Foundation, either version 3 of the License, or
 *  (at your option) any later version.
 *
 *  This program is distributed in the hope that it will be useful,
 *  but WITHOUT ANY WARRANTY; without even the implied warranty of
 *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 *  GNU General Public License for more details.
 *
 *  You should have received a copy of the GNU General Public License
 *  along with this program.  If not, see <http://www.gnu.org/licenses/>.
 */

#ifndef SDBG_BUILDER_LV2_GPU_FUNCTIONS_H
#define SDBG_BUILDER_LV2_GPU_FUNCTIONS_H

#include "definitions.h"
// single thread
void cuda_init();
void get_cuda_memory(size_t &free_mem, size_t &total_mem);
void lv2_gpu_sort(edge_word_t *lv2_substrings, uint32_t *permutation, int words_per_substring, int64_t lv2_num_items);

#endif // SDBG_BUILDER_LV2_GPU_FUNCTIONS_H