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tabix slicing improvements #10

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mlin opened this issue Jul 21, 2018 · 1 comment
Open

tabix slicing improvements #10

mlin opened this issue Jul 21, 2018 · 1 comment
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@mlin
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mlin commented Jul 21, 2018

  1. Current logic extracts records with POS >= qlo (query low) but omits records with POS < qlo && END >= qlo.
  2. More thorough testing would be nice.
  3. The way checkpoints are detected feels vaguely brittle.
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mlin commented Feb 5, 2019 •
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It would help to require that a checkpoint record must not follow any other record whose END >= checkpointPOS (on the same contig)

@mlin mlin added the bug Something isn't working label Nov 10, 2020
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