DESCRIPTION

Package: iEDGE
Type: Package
Title: integrative analysis of (epi-)DNA and gene expression data
Version: 1.0
Date: 2016-05-18
Authors@R: c(person(given="Amy", family="Li", email="lia978@gmail.com", 
             role=c("aut","cre")),
             person(given="Stefano", family="Monti", email="smonti@bu.edu", 
             role=c("aut")))
Description: iEDGE performs integrative analysis of (epi-)DNA data (methylation,
    microRNA, or copy number alteration) and gene expression data from paired
    samples.
URL: https://github.com/montilab/iEDGE
biocViews:
    limma,
    sva
BugReports: https://github.com/montilab/iEDGE/issues
Depends:
    R (>= 2.11.0),
    Biobase
Imports:
    Biobase,
    plyr,
    XML,
    jsonlite,
    knitr,
    RColorBrewer,
    AnnotationDbi,
    cba,
    heatmap.plus,
    limma, 
    sva,
    parallel
License: GPL-3 + file LICENSE
LazyData: true
RoxygenNote: 6.1.1
VignetteBuilder: knitr
Suggests: 
    rmarkdown