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restapidoc.json
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restapidoc.json
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{
"basePath": "Fill with basePath config",
"apis": [
{
"methods": [
{
"headers": [],
"bodyobject": {
"mapKeyObject": "",
"jsondocId": "1c880b01-4915-449c-a7ed-0e98be0a57ba",
"mapValueObject": "",
"map": "",
"object": "annotation editor",
"multiple": "Unknow"
},
"jsondocId": "2a7608fb-4dd1-40dd-8c23-eecaf241f37c",
"consumes": ["application/json"],
"response": {
"mapKeyObject": "",
"jsondocId": "01590b28-438c-4480-9480-e40db453b4a7",
"mapValueObject": "",
"object": "annotation editor"
},
"pathparameters": [],
"apierrors": [],
"verb": "POST",
"description": "Set description for a feature",
"queryparameters": [
{
"jsondocId": "43636b04-187a-4f6c-acc2-78bfae4b5c30",
"description": "",
"name": "username",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "email"
},
{
"jsondocId": "401a1817-618c-4a24-b900-6ee53b021f97",
"description": "",
"name": "password",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "password"
},
{
"jsondocId": "11333595-e1e1-40a0-9733-e7bd06c34598",
"description": "(optional) Sequence name",
"name": "sequence",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
},
{
"jsondocId": "d733866e-f870-4c4f-9dc3-3559e3dc9c9e",
"description": "(optional) Organism ID or common name",
"name": "organism",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
},
{
"jsondocId": "71f16f37-2032-4f0e-8608-1d67f074d66a",
"description": "JSONArray containing JSON objects with {'uniquename':'ABCD-1234','description':'some descriptive test'}",
"name": "features",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "JSONArray"
}
],
"path": "/annotationEditor/setDescription",
"produces": ["application/json"],
"methodName": "setDescription"
},
{
"headers": [],
"bodyobject": {
"mapKeyObject": "",
"jsondocId": "3e3e9521-05b0-41a4-9664-8c4001ed478d",
"mapValueObject": "",
"map": "",
"object": "annotation editor",
"multiple": "Unknow"
},
"jsondocId": "19f9b28e-4415-4c91-88e1-82ba8b1f7267",
"consumes": ["application/json"],
"response": {
"mapKeyObject": "",
"jsondocId": "acb1fd38-4200-40f6-a17e-3f69a1dde926",
"mapValueObject": "",
"object": "annotation editor"
},
"pathparameters": [],
"apierrors": [],
"verb": "POST",
"description": "Set status of a feature",
"queryparameters": [
{
"jsondocId": "27030d83-af2f-4d8d-87bb-d784d505aa6e",
"description": "",
"name": "username",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "email"
},
{
"jsondocId": "7a8e38dc-6028-4feb-8e21-727b000c6b2b",
"description": "",
"name": "password",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "password"
},
{
"jsondocId": "490b937b-8c8f-4e84-953f-88973242cf40",
"description": "(optional) Sequence name",
"name": "sequence",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
},
{
"jsondocId": "da8cb5c1-6566-4825-a948-da0ae40256b5",
"description": "(optional) Organism ID or common name",
"name": "organism",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
},
{
"jsondocId": "b64393a4-4daa-4326-9f93-ed3aaa812c87",
"description": "JSONArray containing JSON objects with {'uniquename':'ABCD-1234','status':'existing-status-string'}. Available status found here: /availableStatus/ ",
"name": "features",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "JSONArray"
}
],
"path": "/annotationEditor/setStatus",
"produces": ["application/json"],
"methodName": "setStatus"
},
{
"headers": [],
"bodyobject": {
"mapKeyObject": "",
"jsondocId": "b7802ffb-fce6-4d23-9921-71616a9061c2",
"mapValueObject": "",
"map": "",
"object": "annotation editor",
"multiple": "Unknow"
},
"jsondocId": "72dc1028-b3c8-4255-94b9-d1c489db0eed",
"consumes": ["application/json"],
"response": {
"mapKeyObject": "",
"jsondocId": "89432e84-dfe0-46ad-9d30-2cb2274f3176",
"mapValueObject": "",
"object": "annotation editor"
},
"pathparameters": [],
"apierrors": [],
"verb": "POST",
"description": "Returns a translation table as JSON",
"queryparameters": [],
"path": "/annotationEditor/getTranslationTable",
"produces": ["application/json"],
"methodName": "getTranslationTable"
},
{
"headers": [],
"bodyobject": {
"mapKeyObject": "",
"jsondocId": "6270a299-c385-4228-a7f5-ef92359aaf72",
"mapValueObject": "",
"map": "",
"object": "annotation editor",
"multiple": "Unknow"
},
"jsondocId": "5555b820-ff92-47a7-914e-ea400f21c19b",
"consumes": ["application/json"],
"response": {
"mapKeyObject": "",
"jsondocId": "6d14141c-7e3c-44bb-ae74-f737c6f707b3",
"mapValueObject": "",
"object": "annotation editor"
},
"pathparameters": [],
"apierrors": [],
"verb": "POST",
"description": "Get comments",
"queryparameters": [
{
"jsondocId": "7aeee7aa-94c9-417e-af7a-7c897aeaa478",
"description": "",
"name": "username",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "email"
},
{
"jsondocId": "f5e2baa9-8332-4845-89a7-e51c30ed7268",
"description": "",
"name": "password",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "password"
},
{
"jsondocId": "31c29722-7ff2-4342-9d81-e5c9e6340d9b",
"description": "(optional) Sequence name",
"name": "sequence",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
},
{
"jsondocId": "91364a90-b765-4a70-8483-f8679bc7bbfd",
"description": "(optional) Organism ID or common name",
"name": "organism",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
},
{
"jsondocId": "1c3feef2-e1ad-41a1-9882-e440209b3f45",
"description": "JSONArray of JSON feature objects ('uniquename' required) JSONArray described by https://github.com/GMOD/Apollo/blob/master/grails-app/domain/org/bbop/apollo/Feature.groovy",
"name": "features",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "JSONArray"
}
],
"path": "/annotationEditor/getComments",
"produces": ["application/json"],
"methodName": "getComments"
},
{
"headers": [],
"bodyobject": {
"mapKeyObject": "",
"jsondocId": "62a60546-564c-46b6-98a8-54e0fbb295f7",
"mapValueObject": "",
"map": "",
"object": "annotation editor",
"multiple": "Unknow"
},
"jsondocId": "be70c3ff-e6d5-4281-956d-f678bfeb92ac",
"consumes": ["application/json"],
"response": {
"mapKeyObject": "",
"jsondocId": "e9096a80-f237-4efb-ad46-38742fc2e6a8",
"mapValueObject": "",
"object": "annotation editor"
},
"pathparameters": [],
"apierrors": [],
"verb": "POST",
"description": "Get all annotated features for a sequence",
"queryparameters": [
{
"jsondocId": "eaea7e0b-dab3-4fd5-b8e6-9357e3cdeef8",
"description": "",
"name": "username",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "email"
},
{
"jsondocId": "ebb0bca4-7767-47e5-8908-cf0c6d7e4e73",
"description": "",
"name": "password",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "password"
},
{
"jsondocId": "7ce920b3-eddf-4923-b347-a86c2a55158b",
"description": "(optional) Sequence name",
"name": "sequence",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
},
{
"jsondocId": "2459e460-69be-4496-8660-3cdf732b8d65",
"description": "(optional) Organism ID or common name",
"name": "organism",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
}
],
"path": "/annotationEditor/getFeatures",
"produces": ["application/json"],
"methodName": "getFeatures"
},
{
"headers": [],
"bodyobject": {
"mapKeyObject": "",
"jsondocId": "3e34e1dd-c8ab-494e-983d-5252d929b316",
"mapValueObject": "",
"map": "",
"object": "annotation editor",
"multiple": "Unknow"
},
"jsondocId": "43428856-584d-4cd7-91f3-b2cc24ffb6b3",
"consumes": ["application/json"],
"response": {
"mapKeyObject": "",
"jsondocId": "964be969-fa05-476d-ba31-4e36aaa3f949",
"mapValueObject": "",
"object": "annotation editor"
},
"pathparameters": [],
"apierrors": [],
"verb": "POST",
"description": "Get sequences for features",
"queryparameters": [
{
"jsondocId": "7abf60dc-107f-4cd1-847a-63d916464be5",
"description": "",
"name": "username",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "email"
},
{
"jsondocId": "1f0c095f-cac4-4c5f-8303-63a7c752e7d2",
"description": "",
"name": "password",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "password"
},
{
"jsondocId": "537d4db2-70e7-48a9-af5c-82512d17fefa",
"description": "(optional) Sequence name",
"name": "sequence",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
},
{
"jsondocId": "6a6fa852-3e9b-41a5-989a-eed20201cf06",
"description": "(optional) Organism ID or common name",
"name": "organism",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
},
{
"jsondocId": "ec5a8355-006d-4241-be1a-27860ae08e06",
"description": "JSONArray of features objects to export defined by a unique name {'uniquename':'ABC123'}",
"name": "features",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "JSONArray"
}
],
"path": "/annotationEditor/getSequences",
"produces": ["application/json"],
"methodName": "getSequence"
},
{
"headers": [],
"bodyobject": {
"mapKeyObject": "",
"jsondocId": "eda4a48c-5703-4681-bd7a-8448853d42eb",
"mapValueObject": "",
"map": "",
"object": "annotation editor",
"multiple": "Unknow"
},
"jsondocId": "472b4880-c26c-454a-b24a-28902abe1f73",
"consumes": ["application/json"],
"response": {
"mapKeyObject": "",
"jsondocId": "aa0efb0c-006a-4163-b057-e3666e9738e9",
"mapValueObject": "",
"object": "annotation editor"
},
"pathparameters": [],
"apierrors": [],
"verb": "POST",
"description": "Add attribute (key,value pair) to feature",
"queryparameters": [
{
"jsondocId": "74e80360-9017-4184-be21-cf48c756e7ca",
"description": "",
"name": "username",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "email"
},
{
"jsondocId": "31270e55-b2ee-42d1-9ddf-6044f6e12409",
"description": "",
"name": "password",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "password"
},
{
"jsondocId": "a532a9e3-d8f9-4ea3-959b-c83cba9abe8b",
"description": "(optional) Sequence name",
"name": "sequence",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
},
{
"jsondocId": "f9d2fb59-69d8-4515-819a-f4e082be79f3",
"description": "(optional) Organism ID or common name",
"name": "organism",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "string"
},
{
"jsondocId": "ab2258d7-31f4-41e6-8a39-cac334a4dc40",
"description": "JSONArray containing JSON objects with {'uniquename':'ABCD-1234','non_reserved_properties':[{'tag':'clockwark','value':'orange'},{'tag':'color','value':'purple'}]}. Available status found here: /availableStatus/ ",
"name": "features",
"allowedvalues": [],
"format": "",
"required": "true",
"type": "JSONArray"
}
],
"path": "/annotationEditor/addAttribute",
"produces": ["application/json"],
"methodName": "addAttribute"
},
{
"headers": [],
"bodyobject": {
"mapKeyObject": "",
"jsondocId": "6d4f646b-8e77-46c5-9116-5bdd0a8984e4",
"mapValueObject": "",
"map": "",
"object": "annotation editor",
"multiple": "Unknow"
},
"jsondocId": "1fd4603d-0f2d-48b7-8710-1b54e2de2339",
"consumes": ["application/json"],
"response": {
"mapKeyObject": "",
"jsondocId": "76f5bb6b-a26c-43c2-b657-44139c6897bc",
"mapValueObject": "",
"object": "annotation editor"
},
"pathparameters": [],
"apierrors": [],
"verb": "POST",
"description": "Set symbol of a feature",
"queryparameters": [
{
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