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UMI extraction #19

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mirpedrol opened this issue Mar 10, 2023 · 1 comment
Closed

UMI extraction #19

mirpedrol opened this issue Mar 10, 2023 · 1 comment
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enhancement Improvement for existing functionality

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@mirpedrol
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Description of feature

Create a module for extracting UMIs form sequencing reads

@mirpedrol mirpedrol added the enhancement Improvement for existing functionality label Mar 10, 2023
@mirpedrol
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After having a look at this issue, I realized it's not the best solution, as nf-core modules can only use python scripts as templates, what would require modifying the original code, or using the script inside a container, what would require the authors to release this script as a standalone python package.
For now, I think the best option is to keep it as a local module.

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