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Some fields at nextflow_schema.json file define default values like an string ("default": "NULL") this will be a problem in the upcoming version of tower.nf. The "NULL" string will be set at the launchpad form and send to Nextflow when launching the pipeline. Finally the run will fail because Nextflow will interpret it as a string and not as an empty parameter.
Solution
Aligned with the discussion here about enforcing stricter rules for initialising params with no default value, I suggest to just set this fields to null at nextflow.config file and remove the default setting from the schema file. This will be compatible with the future tower.nf release.
The text was updated successfully, but these errors were encountered:
Description
Some fields at
nextflow_schema.json
file define default values like an string ("default": "NULL"
) this will be a problem in the upcoming version of tower.nf. The "NULL" string will be set at the launchpad form and send to Nextflow when launching the pipeline. Finally the run will fail because Nextflow will interpret it as a string and not as an empty parameter.Solution
Aligned with the discussion here about enforcing stricter rules for initialising params with no default value, I suggest to just set this fields to
null
atnextflow.config
file and remove the default setting from the schema file. This will be compatible with the future tower.nf release.The text was updated successfully, but these errors were encountered: