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java.lang.OutOfMemoryError: Java heap space with FastQC #283

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jlandry69 opened this issue Oct 30, 2024 · 0 comments
Open

java.lang.OutOfMemoryError: Java heap space with FastQC #283

jlandry69 opened this issue Oct 30, 2024 · 0 comments
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@jlandry69
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Description of the bug

Hi all,
I am running the pipeline on nanopore and PacBio long read data and having the same error as described here:

"java.lang.OutOfMemoryError: Java heap space" with FastQC v0.11.9

The latest version of fastqc can now handle this with the "--memory" argument.

Would it be possible ti update the fastqc version to the latest please?

Many thanks

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@jlandry69 jlandry69 added the bug Something isn't working label Oct 30, 2024
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@jlandry69