Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Fusion-report: make COSMIC optional #514

Closed
rannick opened this issue Nov 12, 2024 · 3 comments · Fixed by #547
Closed

Fusion-report: make COSMIC optional #514

rannick opened this issue Nov 12, 2024 · 3 comments · Fixed by #547
Assignees
@rannick

Comments

@rannick
Copy link
Collaborator

rannick commented Nov 12, 2024

Description of feature

Fusion-report: make COSMIC optional
@rannick rannick changed the title Fusion-report: make COSMIC optiona Fusion-report: make COSMIC optional Nov 12, 2024
@gatoravi
Copy link

gatoravi commented Nov 16, 2024 •
edited
Loading

+1
I see these options on the latest release of fusionreport: "--no-cosmic/--no-fusiongdb2/--no-mitelman to download and run without those specified databases". Would the plan be to use these options?

@rannick
Copy link
Collaborator Author

rannick commented Nov 28, 2024

Yes

@rannick rannick mentioned this issue Nov 28, 2024
Merged
10 tasks
@rannick rannick moved this from ToDo high priority to In progress in rnafusion Nov 28, 2024
@rannick rannick self-assigned this Nov 28, 2024
@rannick
Copy link
Collaborator Author

rannick commented Dec 3, 2024

Closing as completed

@rannick rannick closed this as completed Dec 3, 2024
@github-project-automation github-project-automation bot moved this from In progress to Done in rnafusion Dec 3, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees

@rannick rannick

Labels
None yet
Projects
rnafusion
Status: Done
Milestone
No milestone
Development

Successfully merging a pull request may close this issue.

Make using COSMIC optional nf-core/rnafusion
2 participants
@gatoravi @rannick