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view outliers app #16

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4 tasks done
nhoffman opened this issue Sep 10, 2018 · 5 comments
Closed
4 tasks done

view outliers app #16

nhoffman opened this issue Sep 10, 2018 · 5 comments
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@crosenth

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@nhoffman
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nhoffman commented Sep 10, 2018 •
edited by crosenth
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Tests

  • search for sequence name
  • search for accession
  • search for accession with multiple hits
  • url-encode accession
@crosenth crosenth self-assigned this Sep 10, 2018
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crosenth commented Sep 10, 2018 •
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Modifications

  • Make box select the default menu bar tool
  • open up new tab when selecting records and match species in table
  • add rank order to axes when using dist
  • add match species to possible axes
  • add new multi-drop down menus [selection visibility] [isolation_source match_species outlier_detection type published]
  • improve showing of selected glyphs (move to front, decrease opacity of other glyphs, etc)
  • add select and deselect all markers (glyphs) option
  • Allow color and shape manipulation for plot markers
  • Move selectors above the plot
  • pin requirements
  • update bin/to_feather.py to modify data for app
  • setup gunicorn server with ssl
  • separate legend into color and shape legends
  • read data in using Python feather library and gzip
  • setup volume mounting on Dokku
  • setup LetsEncrypt plugin on Dokku
  • add E faecalis, E faecium, E avium to the test data set feather file

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crosenth commented Oct 5, 2018

In order to accomplish "pin requirements" I need to raise an Issue with https://github.com/plotly/dash-core-components to get more information as to why axes autorange values are no longer available in figure.layout.[xaxis yaxis].range after dash-core-components version 0.30.1.

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crosenth commented Oct 5, 2018

plotly/dash-core-components#321

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Beta release

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I have created Issues for the four remaining tasks/enhancements: #18, #19, #20, #21

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